Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AC026436.1-201ENST00000510537 270 ntBASIC2.44□□□□□ -2.02
VCANP13611 AC068657.1-201ENST00000520807 306 ntBASIC2.44□□□□□ -2.02
VCANP13611 SUB1P3-201ENST00000564581 315 ntBASIC2.44□□□□□ -2.02
VCANP13611 AL391813.2-201ENST00000609113 322 ntBASIC2.44□□□□□ -2.02
VCANP13611 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
VCANP13611 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VCANP13611 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC2.43□□□□□ -2.02
VCANP13611 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
VCANP13611 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC2.43□□□□□ -2.02
VCANP13611 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
VCANP13611 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
VCANP13611 MTND5P19-201ENST00000424872 1794 ntBASIC2.43□□□□□ -2.02
VCANP13611 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
VCANP13611 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.43□□□□□ -2.02
VCANP13611 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
VCANP13611 AC009237.2-201ENST00000421358 284 ntBASIC2.43□□□□□ -2.02
VCANP13611 SETP4-201ENST00000455717 868 ntBASIC2.43□□□□□ -2.02
VCANP13611 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
VCANP13611 ARL2BPP2-201ENST00000550907 489 ntBASIC2.43□□□□□ -2.02
VCANP13611 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.43□□□□□ -2.02
VCANP13611 MIR1291-201ENST00000627649 87 ntBASIC2.43□□□□□ -2.02
VCANP13611 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
VCANP13611 AC069528.2-201ENST00000624849 1991 ntBASIC2.43□□□□□ -2.02
VCANP13611 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VCANP13611 Y_RNA.354-201ENST00000365448 111 ntBASIC2.43□□□□□ -2.02
VCANP13611 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
VCANP13611 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
VCANP13611 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.43□□□□□ -2.02
VCANP13611 AC021146.8-201ENST00000507455 733 ntBASIC2.43□□□□□ -2.02
VCANP13611 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC2.42□□□□□ -2.02
VCANP13611 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
VCANP13611 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VCANP13611 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
VCANP13611 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.42□□□□□ -2.02
VCANP13611 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.42□□□□□ -2.02
VCANP13611 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.42□□□□□ -2.02
VCANP13611 SNRPGP18-201ENST00000553000 214 ntBASIC2.42□□□□□ -2.02
VCANP13611 MIR4285-201ENST00000581001 85 ntBASIC2.42□□□□□ -2.02
VCANP13611 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.42□□□□□ -2.02
VCANP13611 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.42□□□□□ -2.02
VCANP13611 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.42□□□□□ -2.02
VCANP13611 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
VCANP13611 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC2.42□□□□□ -2.02
VCANP13611 HMGB1P19-201ENST00000517578 577 ntBASIC2.42□□□□□ -2.02
VCANP13611 RPL21P3-201ENST00000395517 478 ntBASIC2.41□□□□□ -2.02
VCANP13611 AL591416.1-201ENST00000404015 867 ntBASIC2.41□□□□□ -2.02
VCANP13611 RPL23AP76-201ENST00000441860 458 ntBASIC2.41□□□□□ -2.02
VCANP13611 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC2.41□□□□□ -2.02
VCANP13611 IGKV2D-23-201ENST00000518179 286 ntBASIC2.41□□□□□ -2.02
VCANP13611 AC015911.5-201ENST00000587076 451 ntBASIC2.41□□□□□ -2.02
VCANP13611 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
VCANP13611 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VCANP13611 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
VCANP13611 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VCANP13611 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
VCANP13611 RPL9P7-201ENST00000330965 580 ntBASIC2.41□□□□□ -2.02
VCANP13611 RNU1-75P-201ENST00000347264 129 ntBASIC2.41□□□□□ -2.02
VCANP13611 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.41□□□□□ -2.02
VCANP13611 AC016687.1-201ENST00000482574 353 ntBASIC2.41□□□□□ -2.02
VCANP13611 RN7SL633P-201ENST00000488974 297 ntBASIC2.41□□□□□ -2.02
VCANP13611 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
VCANP13611 AL354943.1-201ENST00000572103 781 ntBASIC2.41□□□□□ -2.02
VCANP13611 AC092628.2-201ENST00000622492 339 ntBASIC2.41□□□□□ -2.02
VCANP13611 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
VCANP13611 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC2.41□□□□□ -2.02
VCANP13611 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VCANP13611 Y_RNA.205-201ENST00000364128 113 ntBASIC2.41□□□□□ -2.02
VCANP13611 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.41□□□□□ -2.02
VCANP13611 CR589904.2-201ENST00000612533 440 ntBASIC2.41□□□□□ -2.02
VCANP13611 RNA5SP190-201ENST00000365222 118 ntBASIC2.4□□□□□ -2.02
VCANP13611 MIR583-201ENST00000384846 75 ntBASIC2.4□□□□□ -2.02
VCANP13611 AP004217.1-201ENST00000480579 346 ntBASIC2.4□□□□□ -2.02
VCANP13611 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.4□□□□□ -2.02
VCANP13611 PSMA3P-201ENST00000555485 635 ntBASIC2.4□□□□□ -2.02
VCANP13611 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.4□□□□□ -2.02
VCANP13611 AC010546.1-201ENST00000569391 485 ntBASIC2.4□□□□□ -2.02
VCANP13611 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.02
VCANP13611 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC2.4□□□□□ -2.03
VCANP13611 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.4□□□□□ -2.03
VCANP13611 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
VCANP13611 RNA5SP456-201ENST00000364002 114 ntBASIC2.4□□□□□ -2.03
VCANP13611 RNU6-1-201ENST00000383898 107 ntBASIC2.4□□□□□ -2.03
VCANP13611 RNU6-42P-201ENST00000384165 107 ntBASIC2.4□□□□□ -2.03
VCANP13611 RNU6-36P-201ENST00000384172 107 ntBASIC2.4□□□□□ -2.03
VCANP13611 RNU6-4P-201ENST00000384205 107 ntBASIC2.4□□□□□ -2.03
VCANP13611 RNU6-5P-201ENST00000384238 107 ntBASIC2.4□□□□□ -2.03
VCANP13611 RNU6-3P-201ENST00000384314 107 ntBASIC2.4□□□□□ -2.03
VCANP13611 RNU6-2-201ENST00000384627 107 ntBASIC2.4□□□□□ -2.03
VCANP13611 RNU6-9-201ENST00000384776 107 ntBASIC2.4□□□□□ -2.03
VCANP13611 RNU6-33P-201ENST00000384793 107 ntBASIC2.4□□□□□ -2.03
VCANP13611 GTF2IP23-201ENST00000423746 351 ntBASIC2.4□□□□□ -2.03
VCANP13611 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.4□□□□□ -2.03
VCANP13611 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.4□□□□□ -2.03
VCANP13611 KCTD9P5-201ENST00000504141 1170 ntBASIC2.4□□□□□ -2.03
VCANP13611 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.4□□□□□ -2.03
VCANP13611 RNU6-6P-201ENST00000606623 107 ntBASIC2.4□□□□□ -2.03
VCANP13611 AC108479.2-201ENST00000617314 601 ntBASIC2.4□□□□□ -2.03
VCANP13611 AC010480.1-201ENST00000624823 684 ntBASIC2.4□□□□□ -2.03
VCANP13611 AC097714.1-201ENST00000511272 1647 ntBASIC2.4□□□□□ -2.03
VCANP13611 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms