Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
COL6A2P12110 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
COL6A2P12110 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
COL6A2P12110 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL6A2P12110 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL6A2P12110 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL6A2P12110 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
COL6A2P12110 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL6A2P12110 RNU6-845P-201ENST00000362578 103 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 SNORA17.1-201ENST00000362945 126 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 RNU6-97P-201ENST00000363387 104 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 RNY4P16-201ENST00000364768 94 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
COL6A2P12110 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL6A2P12110 RNU6-767P-201ENST00000384132 107 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 AC068050.1-201ENST00000394891 380 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 RN7SKP125-201ENST00000410481 302 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 RPS20P15-201ENST00000412792 311 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 AC004987.3-201ENST00000413879 771 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.94□□□□□ -1.62
COL6A2P12110 SDCBPP3-201ENST00000419629 891 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 AC092832.1-201ENST00000422934 400 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 CKS1BP6-201ENST00000424932 240 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.94□□□□□ -1.62
COL6A2P12110 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.94□□□□□ -1.62
COL6A2P12110 RBMY2QP-201ENST00000429799 1147 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 RPL7L1P9-201ENST00000431298 745 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 AC092162.1-201ENST00000432828 434 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 UBE2V1P13-201ENST00000436983 439 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL6A2P12110 AC093156.1-201ENST00000440382 670 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 SPRYD7P1-201ENST00000443861 570 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 AC079781.2-201ENST00000446424 169 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 RPS27AP17-201ENST00000463344 455 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 AC022034.3-201ENST00000471393 478 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.94□□□□□ -1.62
COL6A2P12110 AC022795.1-201ENST00000473808 480 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 RN7SL629P-201ENST00000489622 285 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.94□□□□□ -1.62
COL6A2P12110 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.94□□□□□ -1.62
COL6A2P12110 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.94□□□□□ -1.62
COL6A2P12110 ATP5LP3-201ENST00000514223 304 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.94□□□□□ -1.62
COL6A2P12110 RNA5SP337-201ENST00000517007 109 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.94□□□□□ -1.62
COL6A2P12110 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.94□□□□□ -1.62
COL6A2P12110 AP003497.1-201ENST00000528472 562 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.94□□□□□ -1.62
COL6A2P12110 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.94□□□□□ -1.62
COL6A2P12110 AC011712.1-201ENST00000588959 234 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.94□□□□□ -1.62
COL6A2P12110 AC013244.1-201ENST00000604279 193 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL6A2P12110 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.94□□□□□ -1.62
COL6A2P12110 AC114546.3-201ENST00000623582 1734 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL6A2P12110 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL6A2P12110 ZNF680P1-201ENST00000436625 1469 ntBASIC4.94□□□□□ -1.62
COL6A2P12110 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
COL6A2P12110 AC107068.1-201ENST00000563286 4218 ntBASIC4.93□□□□□ -1.62
COL6A2P12110 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.93□□□□□ -1.62
COL6A2P12110 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
COL6A2P12110 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL6A2P12110 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL6A2P12110 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL6A2P12110 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
COL6A2P12110 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
COL6A2P12110 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL6A2P12110 RNA5SP132-201ENST00000364725 118 ntBASIC4.93□□□□□ -1.62
COL6A2P12110 RNU6-116P-201ENST00000384042 109 ntBASIC4.93□□□□□ -1.62
COL6A2P12110 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.93□□□□□ -1.62
COL6A2P12110 OR3A2-201ENST00000408891 1076 ntBASIC4.93□□□□□ -1.62
COL6A2P12110 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.93□□□□□ -1.62
COL6A2P12110 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.93□□□□□ -1.62
COL6A2P12110 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.93□□□□□ -1.62
COL6A2P12110 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.93□□□□□ -1.62
COL6A2P12110 ELOCP4-201ENST00000420090 333 ntBASIC4.93□□□□□ -1.62
COL6A2P12110 EIF4HP2-201ENST00000424380 563 ntBASIC4.93□□□□□ -1.62
COL6A2P12110 AC007283.2-201ENST00000424739 197 ntBASIC4.93□□□□□ -1.62
COL6A2P12110 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.93□□□□□ -1.62
COL6A2P12110 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.93□□□□□ -1.62
COL6A2P12110 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL6A2P12110 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.93□□□□□ -1.62
COL6A2P12110 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.93□□□□□ -1.62
COL6A2P12110 AC104308.1-201ENST00000454621 333 ntBASIC4.93□□□□□ -1.62
COL6A2P12110 RPS20P24-201ENST00000457473 361 ntBASIC4.93□□□□□ -1.62
COL6A2P12110 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.93□□□□□ -1.62
COL6A2P12110 RPS26P39-201ENST00000469206 341 ntBASIC4.93□□□□□ -1.62
COL6A2P12110 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.93□□□□□ -1.62
COL6A2P12110 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.93□□□□□ -1.62
COL6A2P12110 AC016065.2-201ENST00000514530 444 ntBASIC4.93□□□□□ -1.62
COL6A2P12110 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.93□□□□□ -1.62
COL6A2P12110 OR5AL2P-201ENST00000532185 920 ntBASIC4.93□□□□□ -1.62
COL6A2P12110 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.93□□□□□ -1.62
COL6A2P12110 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.93□□□□□ -1.62
COL6A2P12110 AC063949.1-201ENST00000552900 865 ntBASIC4.93□□□□□ -1.62
COL6A2P12110 AC068446.3-201ENST00000555285 382 ntBASIC4.93□□□□□ -1.62
COL6A2P12110 ANP32BP3-201ENST00000559213 706 ntBASIC4.93□□□□□ -1.62
COL6A2P12110 RPS3AP23-202ENST00000574601 686 ntBASIC4.93□□□□□ -1.62
COL6A2P12110 AC060771.1-201ENST00000582031 164 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms