Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.25□□□□□ -2.05
SPTA1P02549 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SPTA1P02549 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.25□□□□□ -2.05
SPTA1P02549 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC2.25□□□□□ -2.05
SPTA1P02549 AL670379.6-201ENST00000603753 252 ntBASIC2.25□□□□□ -2.05
SPTA1P02549 AL670379.11-201ENST00000604059 253 ntBASIC2.25□□□□□ -2.05
SPTA1P02549 AL670379.10-201ENST00000604330 253 ntBASIC2.25□□□□□ -2.05
SPTA1P02549 AC008162.1-201ENST00000604718 254 ntBASIC2.25□□□□□ -2.05
SPTA1P02549 AL670379.1-201ENST00000604752 252 ntBASIC2.25□□□□□ -2.05
SPTA1P02549 AL670379.2-201ENST00000604983 252 ntBASIC2.25□□□□□ -2.05
SPTA1P02549 AL670379.5-201ENST00000605253 252 ntBASIC2.25□□□□□ -2.05
SPTA1P02549 AL670379.4-201ENST00000605279 254 ntBASIC2.25□□□□□ -2.05
SPTA1P02549 AL670379.12-201ENST00000605291 253 ntBASIC2.25□□□□□ -2.05
SPTA1P02549 AL670379.8-201ENST00000605353 252 ntBASIC2.25□□□□□ -2.05
SPTA1P02549 AL670379.9-201ENST00000605428 253 ntBASIC2.25□□□□□ -2.05
SPTA1P02549 AL670379.7-201ENST00000605823 252 ntBASIC2.25□□□□□ -2.05
SPTA1P02549 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.25□□□□□ -2.05
SPTA1P02549 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.24□□□□□ -2.05
SPTA1P02549 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SPTA1P02549 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.24□□□□□ -2.05
SPTA1P02549 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
SPTA1P02549 AC007064.1-201ENST00000412238 351 ntBASIC2.24□□□□□ -2.05
SPTA1P02549 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.24□□□□□ -2.05
SPTA1P02549 TRBV26-201ENST00000456572 344 ntBASIC2.24□□□□□ -2.05
SPTA1P02549 AC126121.1-201ENST00000482313 553 ntBASIC2.24□□□□□ -2.05
SPTA1P02549 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SPTA1P02549 AC061975.8-201ENST00000587058 721 ntBASIC2.24□□□□□ -2.05
SPTA1P02549 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.24□□□□□ -2.05
SPTA1P02549 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SPTA1P02549 TVP23BP2-201ENST00000455082 615 ntBASIC2.23□□□□□ -2.05
SPTA1P02549 AP000893.1-201ENST00000474462 794 ntBASIC2.23□□□□□ -2.05
SPTA1P02549 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.23□□□□□ -2.05
SPTA1P02549 AL024509.2-201ENST00000493462 493 ntBASIC2.23□□□□□ -2.05
SPTA1P02549 AC005840.1-201ENST00000498412 377 ntBASIC2.23□□□□□ -2.05
SPTA1P02549 AC118282.1-201ENST00000506408 765 ntBASIC2.23□□□□□ -2.05
SPTA1P02549 NDUFA5P6-201ENST00000542110 379 ntBASIC2.23□□□□□ -2.05
SPTA1P02549 AC025946.2-201ENST00000603398 234 ntBASIC2.23□□□□□ -2.05
SPTA1P02549 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
SPTA1P02549 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
SPTA1P02549 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
SPTA1P02549 AL139276.1-201ENST00000311910 1001 ntBASIC2.23□□□□□ -2.05
SPTA1P02549 RNU6-1140P-201ENST00000410517 106 ntBASIC2.23□□□□□ -2.05
SPTA1P02549 AC009318.2-201ENST00000610917 651 ntBASIC2.23□□□□□ -2.05
SPTA1P02549 Z73965.1-201ENST00000623412 2297 ntBASIC2.23□□□□□ -2.05
SPTA1P02549 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SPTA1P02549 EXOC5P1-201ENST00000510543 1969 ntBASIC2.23□□□□□ -2.05
SPTA1P02549 RNU6-707P-201ENST00000364647 95 ntBASIC2.22□□□□□ -2.05
SPTA1P02549 Y_RNA.374-201ENST00000365606 101 ntBASIC2.22□□□□□ -2.05
SPTA1P02549 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SPTA1P02549 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SPTA1P02549 VDAC1P3-201ENST00000434069 851 ntBASIC2.22□□□□□ -2.05
SPTA1P02549 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC2.22□□□□□ -2.05
SPTA1P02549 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.22□□□□□ -2.05
SPTA1P02549 HMGB1P25-201ENST00000468402 607 ntBASIC2.22□□□□□ -2.05
SPTA1P02549 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.22□□□□□ -2.05
SPTA1P02549 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SPTA1P02549 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.22□□□□□ -2.05
SPTA1P02549 AC067747.1-201ENST00000608026 250 ntBASIC2.22□□□□□ -2.05
SPTA1P02549 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.22□□□□□ -2.05
SPTA1P02549 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SPTA1P02549 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.22□□□□□ -2.05
SPTA1P02549 AC093311.1-201ENST00000506586 2021 ntBASIC2.22□□□□□ -2.05
SPTA1P02549 AL353746.1-201ENST00000566293 6881 ntBASIC2.22□□□□□ -2.05
SPTA1P02549 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.22□□□□□ -2.05
SPTA1P02549 AC021146.1-201ENST00000511202 716 ntBASIC2.22□□□□□ -2.05
SPTA1P02549 RNU6-295P-201ENST00000516901 104 ntBASIC2.22□□□□□ -2.05
SPTA1P02549 GABPAP-201ENST00000419271 1356 ntBASIC2.22□□□□□ -2.05
SPTA1P02549 MTCO1P22-201ENST00000604619 1360 ntBASIC2.22□□□□□ -2.05
SPTA1P02549 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SPTA1P02549 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SPTA1P02549 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SPTA1P02549 CACYBPP1-201ENST00000438592 684 ntBASIC2.21□□□□□ -2.06
SPTA1P02549 AC105918.1-201ENST00000474399 838 ntBASIC2.21□□□□□ -2.06
SPTA1P02549 AC026436.1-201ENST00000510537 270 ntBASIC2.21□□□□□ -2.06
SPTA1P02549 ACTR6P1-201ENST00000514311 1104 ntBASIC2.21□□□□□ -2.06
SPTA1P02549 MIR2114-201ENST00000516645 80 ntBASIC2.21□□□□□ -2.06
SPTA1P02549 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC2.21□□□□□ -2.06
SPTA1P02549 AP003385.6-201ENST00000531603 374 ntBASIC2.21□□□□□ -2.06
SPTA1P02549 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.21□□□□□ -2.06
SPTA1P02549 AC128657.1-201ENST00000549459 145 ntBASIC2.21□□□□□ -2.06
SPTA1P02549 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.21□□□□□ -2.06
SPTA1P02549 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SPTA1P02549 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.21□□□□□ -2.06
SPTA1P02549 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SPTA1P02549 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SPTA1P02549 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
SPTA1P02549 MTND5P6-201ENST00000422338 1798 ntBASIC2.21□□□□□ -2.06
SPTA1P02549 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SPTA1P02549 SNORA41-201ENST00000384675 132 ntBASIC2.21□□□□□ -2.06
SPTA1P02549 MIR583-201ENST00000384846 75 ntBASIC2.21□□□□□ -2.06
SPTA1P02549 RAC1P3-201ENST00000416129 580 ntBASIC2.21□□□□□ -2.06
SPTA1P02549 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.21□□□□□ -2.06
SPTA1P02549 USP9YP20-201ENST00000419224 558 ntBASIC2.21□□□□□ -2.06
SPTA1P02549 SCARNA17.1-201ENST00000516211 143 ntBASIC2.21□□□□□ -2.06
SPTA1P02549 SCARNA17.2-201ENST00000516334 143 ntBASIC2.21□□□□□ -2.06
SPTA1P02549 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.21□□□□□ -2.06
SPTA1P02549 AL591516.1-201ENST00000611326 274 ntBASIC2.21□□□□□ -2.06
SPTA1P02549 SCARNA17.4-201ENST00000614296 143 ntBASIC2.21□□□□□ -2.06
SPTA1P02549 MFSD8-245ENST00000641743 948 ntBASIC2.21□□□□□ -2.06
SPTA1P02549 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms