Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.02□□□□□ -1.93
COL1A1P02452 AC234781.5-201ENST00000508429 271 ntBASIC3.02□□□□□ -1.93
COL1A1P02452 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.02□□□□□ -1.93
COL1A1P02452 AC015712.3-201ENST00000559380 164 ntBASIC3.02□□□□□ -1.93
COL1A1P02452 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.02□□□□□ -1.93
COL1A1P02452 VN1R79P-201ENST00000593540 513 ntBASIC3.02□□□□□ -1.93
COL1A1P02452 AC007423.1-201ENST00000605009 627 ntBASIC3.02□□□□□ -1.93
COL1A1P02452 AC084035.1-201ENST00000634543 607 ntBASIC3.02□□□□□ -1.93
COL1A1P02452 MIR6733-201ENST00000635723 61 ntBASIC3.02□□□□□ -1.93
COL1A1P02452 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
COL1A1P02452 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
COL1A1P02452 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
COL1A1P02452 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.01□□□□□ -1.93
COL1A1P02452 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
COL1A1P02452 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
COL1A1P02452 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.01□□□□□ -1.93
COL1A1P02452 XIAPP3-201ENST00000312918 795 ntBASIC3.01□□□□□ -1.93
COL1A1P02452 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
COL1A1P02452 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
COL1A1P02452 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
COL1A1P02452 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
COL1A1P02452 NANOGP5-201ENST00000424456 877 ntBASIC3.01□□□□□ -1.93
COL1A1P02452 AL591806.2-201ENST00000433122 173 ntBASIC3.01□□□□□ -1.93
COL1A1P02452 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
COL1A1P02452 HMGB3P12-201ENST00000438745 556 ntBASIC3.01□□□□□ -1.93
COL1A1P02452 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.01□□□□□ -1.93
COL1A1P02452 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.01□□□□□ -1.93
COL1A1P02452 RNU6-548P-201ENST00000517083 115 ntBASIC3.01□□□□□ -1.93
COL1A1P02452 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.01□□□□□ -1.93
COL1A1P02452 AC069528.2-201ENST00000624849 1991 ntBASIC3.01□□□□□ -1.93
COL1A1P02452 XPOTP1-201ENST00000443317 2398 ntBASIC3.01□□□□□ -1.93
COL1A1P02452 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
COL1A1P02452 Y_RNA.4-201ENST00000362333 112 ntBASIC3□□□□□ -1.93
COL1A1P02452 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3□□□□□ -1.93
COL1A1P02452 AL606490.7-201ENST00000433136 191 ntBASIC3□□□□□ -1.93
COL1A1P02452 HIGD1AP2-201ENST00000446367 280 ntBASIC3□□□□□ -1.93
COL1A1P02452 RPL7P31-201ENST00000450192 724 ntBASIC3□□□□□ -1.93
COL1A1P02452 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3□□□□□ -1.93
COL1A1P02452 MIR1273D-201ENST00000577266 86 ntBASIC3□□□□□ -1.93
COL1A1P02452 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
COL1A1P02452 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3□□□□□ -1.93
COL1A1P02452 AL136964.1-201ENST00000622038 2990 ntBASIC3□□□□□ -1.93
COL1A1P02452 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.99□□□□□ -1.93
COL1A1P02452 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.99□□□□□ -1.93
COL1A1P02452 Y_RNA.226-201ENST00000364337 114 ntBASIC2.99□□□□□ -1.93
COL1A1P02452 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
COL1A1P02452 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
COL1A1P02452 RPS20P25-201ENST00000412447 352 ntBASIC2.99□□□□□ -1.93
COL1A1P02452 AL390023.1-201ENST00000428836 262 ntBASIC2.99□□□□□ -1.93
COL1A1P02452 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.99□□□□□ -1.93
COL1A1P02452 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.99□□□□□ -1.93
COL1A1P02452 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.99□□□□□ -1.93
COL1A1P02452 SNORD116-26-201ENST00000516006 96 ntBASIC2.99□□□□□ -1.93
COL1A1P02452 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC2.99□□□□□ -1.93
COL1A1P02452 CBX3P5-201ENST00000552017 521 ntBASIC2.99□□□□□ -1.93
COL1A1P02452 AC084757.1-201ENST00000559987 490 ntBASIC2.99□□□□□ -1.93
COL1A1P02452 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.99□□□□□ -1.93
COL1A1P02452 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.99□□□□□ -1.93
COL1A1P02452 SNORA35B-201ENST00000607417 129 ntBASIC2.99□□□□□ -1.93
COL1A1P02452 AC004925.1-201ENST00000624256 2706 ntBASIC2.99□□□□□ -1.93
COL1A1P02452 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL1A1P02452 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.99□□□□□ -1.93
COL1A1P02452 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
COL1A1P02452 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.98□□□□□ -1.93
COL1A1P02452 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
COL1A1P02452 VN1R31P-201ENST00000417498 730 ntBASIC2.98□□□□□ -1.93
COL1A1P02452 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.98□□□□□ -1.93
COL1A1P02452 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.98□□□□□ -1.93
COL1A1P02452 RPS12P2-201ENST00000439728 269 ntBASIC2.98□□□□□ -1.93
COL1A1P02452 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.98□□□□□ -1.93
COL1A1P02452 RPL36AP33-201ENST00000450395 310 ntBASIC2.98□□□□□ -1.93
COL1A1P02452 GSTA11P-201ENST00000452866 669 ntBASIC2.98□□□□□ -1.93
COL1A1P02452 RPL9P32-201ENST00000464118 620 ntBASIC2.98□□□□□ -1.93
COL1A1P02452 TRBV8-1-201ENST00000481590 279 ntBASIC2.98□□□□□ -1.93
COL1A1P02452 RN7SL636P-201ENST00000497504 294 ntBASIC2.98□□□□□ -1.93
COL1A1P02452 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC2.98□□□□□ -1.93
COL1A1P02452 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.98□□□□□ -1.93
COL1A1P02452 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.98□□□□□ -1.93
COL1A1P02452 OR7K1P-201ENST00000546439 926 ntBASIC2.98□□□□□ -1.93
COL1A1P02452 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.98□□□□□ -1.93
COL1A1P02452 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.98□□□□□ -1.93
COL1A1P02452 BNIP3P8-201ENST00000597863 560 ntBASIC2.98□□□□□ -1.93
COL1A1P02452 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL1A1P02452 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL1A1P02452 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL1A1P02452 RNU1-73P-201ENST00000383971 164 ntBASIC2.97□□□□□ -1.93
COL1A1P02452 RNA5SP105-201ENST00000391123 113 ntBASIC2.97□□□□□ -1.93
COL1A1P02452 MIR1289-2-201ENST00000408360 111 ntBASIC2.97□□□□□ -1.93
COL1A1P02452 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.97□□□□□ -1.93
COL1A1P02452 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.97□□□□□ -1.93
COL1A1P02452 KLHL2P1-201ENST00000508691 521 ntBASIC2.97□□□□□ -1.93
COL1A1P02452 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.97□□□□□ -1.93
COL1A1P02452 AC108471.1-201ENST00000513977 287 ntBASIC2.97□□□□□ -1.93
COL1A1P02452 SNORA31.1-201ENST00000515993 133 ntBASIC2.97□□□□□ -1.93
COL1A1P02452 SNORA31.5-201ENST00000516190 133 ntBASIC2.97□□□□□ -1.93
COL1A1P02452 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.97□□□□□ -1.93
COL1A1P02452 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.97□□□□□ -1.93
COL1A1P02452 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.97□□□□□ -1.93
COL1A1P02452 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
COL1A1P02452 AC099063.3-201ENST00000642066 185 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms