Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 AL022238.1-201ENST00000442557 355 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 Z80107.2-201ENST00000445127 392 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 AL592447.1-201ENST00000447592 540 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 AC000111.2-201ENST00000448200 210 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 PDSS1P2-201ENST00000449397 678 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.23□□□□□ -1.57
CLSTN1O94985 SNORD121B-201ENST00000458838 81 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 RPS17P2-201ENST00000461663 408 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 RPS3AP41-201ENST00000462701 778 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 AC078785.3-201ENST00000476607 425 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 AC011005.3-201ENST00000491624 395 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 AC112204.1-201ENST00000502591 103 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 RNU6-1095P-201ENST00000516148 108 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 Y_RNA.719-201ENST00000517156 106 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 OR5M7P-201ENST00000526140 972 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 AC022878.1-201ENST00000530684 149 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.23□□□□□ -1.57
CLSTN1O94985 AC012213.3-201ENST00000577199 777 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 MIR3667-201ENST00000581025 74 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 AC005771.1-201ENST00000585581 349 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.23□□□□□ -1.57
CLSTN1O94985 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.23□□□□□ -1.57
CLSTN1O94985 BNIP3P8-201ENST00000597863 560 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 AC112191.3-201ENST00000604371 277 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 AL139286.2-201ENST00000606838 396 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 AP001521.2-201ENST00000608772 546 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 AC090425.2-201ENST00000608818 501 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 OR10AB1P-201ENST00000609613 938 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 AC006023.2-201ENST00000609916 167 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 Mico1.1-201ENST00000611698 204 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.23□□□□□ -1.57
CLSTN1O94985 AL022401.1-201ENST00000619498 108 ntBASIC5.23□□□□□ -1.57
CLSTN1O94985 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLSTN1O94985 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLSTN1O94985 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLSTN1O94985 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.23□□□□□ -1.57
CLSTN1O94985 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLSTN1O94985 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
CLSTN1O94985 AP001148.1-201ENST00000624124 2359 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLSTN1O94985 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLSTN1O94985 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLSTN1O94985 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.22□□□□□ -1.57
CLSTN1O94985 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLSTN1O94985 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLSTN1O94985 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.22□□□□□ -1.57
CLSTN1O94985 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLSTN1O94985 RNA5SP191-201ENST00000362585 102 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 RNU6-623P-201ENST00000363143 105 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 RNU1-83P-201ENST00000363426 164 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 RNA5SP235-201ENST00000365411 114 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 RNU6-297P-201ENST00000384636 107 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 SNORD116-4-201ENST00000384733 96 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLSTN1O94985 RNU1-82P-201ENST00000390851 165 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 U3.20-201ENST00000390909 217 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 Y_RNA.608-201ENST00000410647 95 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 HMGN1P14-201ENST00000412459 517 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC5.22□□□□□ -1.57
CLSTN1O94985 CDK8P2-201ENST00000415020 547 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 USP9YP13-201ENST00000417797 480 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.22□□□□□ -1.57
CLSTN1O94985 AC017083.1-201ENST00000428093 483 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 OR4K11P-201ENST00000431829 904 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 UBE2V1P13-201ENST00000436983 439 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.22□□□□□ -1.57
CLSTN1O94985 AL031667.1-201ENST00000440222 725 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.22□□□□□ -1.57
CLSTN1O94985 SSXP1-201ENST00000453640 473 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 NDUFA12P1-201ENST00000455914 406 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 AC005008.1-201ENST00000456151 612 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 AP1S2P1-201ENST00000457344 379 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 RPS4XP13-201ENST00000483219 789 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLSTN1O94985 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.22□□□□□ -1.57
CLSTN1O94985 KCTD9P2-201ENST00000512203 1013 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 AC108064.1-201ENST00000513791 460 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 RNU6-528P-201ENST00000516926 100 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 AP002963.1-201ENST00000530590 184 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.22□□□□□ -1.57
CLSTN1O94985 AP002453.2-201ENST00000533503 320 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.22□□□□□ -1.57
CLSTN1O94985 AC087481.2-201ENST00000565492 330 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.22□□□□□ -1.57
CLSTN1O94985 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.22□□□□□ -1.57
CLSTN1O94985 AC090181.2-201ENST00000602975 672 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 AC011451.2-201ENST00000604303 598 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 AC100827.5-201ENST00000615883 426 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 AC012150.2-201ENST00000621300 544 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 AC112204.3-201ENST00000623822 332 ntBASIC5.22□□□□□ -1.57
CLSTN1O94985 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.22□□□□□ -1.57
CLSTN1O94985 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLSTN1O94985 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLSTN1O94985 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLSTN1O94985 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
CLSTN1O94985 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CLSTN1O94985 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLSTN1O94985 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.21□□□□□ -1.58
CLSTN1O94985 U3.35-201ENST00000408405 208 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms