Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 RNU4-23P-201ENST00000362839 140 ntBASIC2.3□□□□□ -2.04
PDE6DO43924 SNORA51.12-201ENST00000384448 134 ntBASIC2.3□□□□□ -2.04
PDE6DO43924 PPIAP31-201ENST00000405422 495 ntBASIC2.3□□□□□ -2.04
PDE6DO43924 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.3□□□□□ -2.04
PDE6DO43924 AC097713.2-201ENST00000430199 356 ntBASIC2.3□□□□□ -2.04
PDE6DO43924 KCTD10P1-201ENST00000434203 625 ntBASIC2.3□□□□□ -2.04
PDE6DO43924 AC073063.1-201ENST00000434352 607 ntBASIC2.3□□□□□ -2.04
PDE6DO43924 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.3□□□□□ -2.04
PDE6DO43924 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.3□□□□□ -2.04
PDE6DO43924 AC092641.1-201ENST00000440229 772 ntBASIC2.3□□□□□ -2.04
PDE6DO43924 NOTCH2P1-201ENST00000443481 624 ntBASIC2.3□□□□□ -2.04
PDE6DO43924 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC2.3□□□□□ -2.04
PDE6DO43924 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
PDE6DO43924 RPL32P34-201ENST00000486380 400 ntBASIC2.3□□□□□ -2.04
PDE6DO43924 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.3□□□□□ -2.04
PDE6DO43924 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC2.3□□□□□ -2.04
PDE6DO43924 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PDE6DO43924 HAUS1P3-201ENST00000523909 662 ntBASIC2.3□□□□□ -2.04
PDE6DO43924 AP002404.1-201ENST00000532005 451 ntBASIC2.3□□□□□ -2.04
PDE6DO43924 SNRPGP16-201ENST00000533275 226 ntBASIC2.3□□□□□ -2.04
PDE6DO43924 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.3□□□□□ -2.04
PDE6DO43924 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.3□□□□□ -2.04
PDE6DO43924 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.3□□□□□ -2.04
PDE6DO43924 AC009163.5-201ENST00000575421 637 ntBASIC2.3□□□□□ -2.04
PDE6DO43924 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.3□□□□□ -2.04
PDE6DO43924 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.3□□□□□ -2.04
PDE6DO43924 AC017100.2-201ENST00000584628 355 ntBASIC2.3□□□□□ -2.04
PDE6DO43924 AC107982.3-201ENST00000584957 985 ntBASIC2.3□□□□□ -2.04
PDE6DO43924 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
PDE6DO43924 U73023.1-201ENST00000603134 700 ntBASIC2.3□□□□□ -2.04
PDE6DO43924 AP001330.4-201ENST00000604350 154 ntBASIC2.3□□□□□ -2.04
PDE6DO43924 AC013468.1-201ENST00000608680 598 ntBASIC2.3□□□□□ -2.04
PDE6DO43924 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.3□□□□□ -2.04
PDE6DO43924 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.3□□□□□ -2.04
PDE6DO43924 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC2.3□□□□□ -2.04
PDE6DO43924 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.3□□□□□ -2.04
PDE6DO43924 FO624990.1-201ENST00000636373 85 ntBASIC2.3□□□□□ -2.04
PDE6DO43924 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PDE6DO43924 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PDE6DO43924 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.3□□□□□ -2.04
PDE6DO43924 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PDE6DO43924 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
PDE6DO43924 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PDE6DO43924 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PDE6DO43924 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.29□□□□□ -2.04
PDE6DO43924 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
PDE6DO43924 SNORA1.3-201ENST00000384676 136 ntBASIC2.29□□□□□ -2.04
PDE6DO43924 MIR627-201ENST00000384979 97 ntBASIC2.29□□□□□ -2.04
PDE6DO43924 ANAPC10P1-201ENST00000395991 556 ntBASIC2.29□□□□□ -2.04
PDE6DO43924 RPL21P17-201ENST00000397467 475 ntBASIC2.29□□□□□ -2.04
PDE6DO43924 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.29□□□□□ -2.04
PDE6DO43924 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.29□□□□□ -2.04
PDE6DO43924 BX842559.1-201ENST00000419615 532 ntBASIC2.29□□□□□ -2.04
PDE6DO43924 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.29□□□□□ -2.04
PDE6DO43924 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.29□□□□□ -2.04
PDE6DO43924 SBDSP1-204ENST00000453858 737 ntBASIC2.29□□□□□ -2.04
PDE6DO43924 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.29□□□□□ -2.04
PDE6DO43924 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.29□□□□□ -2.04
PDE6DO43924 RPL21P10-201ENST00000463521 490 ntBASIC2.29□□□□□ -2.04
PDE6DO43924 RN7SL385P-201ENST00000468873 276 ntBASIC2.29□□□□□ -2.04
PDE6DO43924 AP002812.1-201ENST00000495378 474 ntBASIC2.29□□□□□ -2.04
PDE6DO43924 RPL37P25-201ENST00000507308 276 ntBASIC2.29□□□□□ -2.04
PDE6DO43924 CDC42P4-201ENST00000510507 563 ntBASIC2.29□□□□□ -2.04
PDE6DO43924 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.29□□□□□ -2.04
PDE6DO43924 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.29□□□□□ -2.04
PDE6DO43924 FAM60DP-201ENST00000524174 632 ntBASIC2.29□□□□□ -2.04
PDE6DO43924 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC2.29□□□□□ -2.04
PDE6DO43924 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.29□□□□□ -2.04
PDE6DO43924 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
PDE6DO43924 RN7SL703P-201ENST00000578485 302 ntBASIC2.29□□□□□ -2.04
PDE6DO43924 MIR5194-201ENST00000582634 120 ntBASIC2.29□□□□□ -2.04
PDE6DO43924 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PDE6DO43924 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC2.29□□□□□ -2.04
PDE6DO43924 AC005972.3-201ENST00000606304 481 ntBASIC2.29□□□□□ -2.04
PDE6DO43924 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC2.29□□□□□ -2.04
PDE6DO43924 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.29□□□□□ -2.04
PDE6DO43924 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.29□□□□□ -2.04
PDE6DO43924 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.29□□□□□ -2.04
PDE6DO43924 MIR622-201ENST00000638396 96 ntBASIC2.29□□□□□ -2.04
PDE6DO43924 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
PDE6DO43924 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.29□□□□□ -2.04
PDE6DO43924 AC135776.4-201ENST00000624300 1904 ntBASIC2.29□□□□□ -2.04
PDE6DO43924 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.04
PDE6DO43924 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
PDE6DO43924 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PDE6DO43924 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PDE6DO43924 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PDE6DO43924 AL359837.1-201ENST00000381357 287 ntBASIC2.28□□□□□ -2.04
PDE6DO43924 MIR181A2-201ENST00000384863 110 ntBASIC2.28□□□□□ -2.04
PDE6DO43924 MIR512-1-201ENST00000384913 84 ntBASIC2.28□□□□□ -2.04
PDE6DO43924 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.28□□□□□ -2.04
PDE6DO43924 AL353678.1-201ENST00000422735 741 ntBASIC2.28□□□□□ -2.04
PDE6DO43924 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.28□□□□□ -2.04
PDE6DO43924 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.28□□□□□ -2.04
PDE6DO43924 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.28□□□□□ -2.04
PDE6DO43924 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC2.28□□□□□ -2.04
PDE6DO43924 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.28□□□□□ -2.04
PDE6DO43924 AC092685.1-201ENST00000447960 1243 ntBASIC2.28□□□□□ -2.04
PDE6DO43924 MORF4L1P4-201ENST00000450245 976 ntBASIC2.28□□□□□ -2.04
PDE6DO43924 AP000705.1-201ENST00000454567 350 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms