Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC006963.1-201ENST00000624003 1052 ntBASIC3.6□□□□□ -1.83
CLDN3O15551 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN3O15551 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN3O15551 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN3O15551 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN3O15551 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN3O15551 RNU1-70P-201ENST00000362618 164 ntBASIC3.59□□□□□ -1.83
CLDN3O15551 RNA5SP258-201ENST00000362750 119 ntBASIC3.59□□□□□ -1.83
CLDN3O15551 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN3O15551 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
CLDN3O15551 RNU6-549P-201ENST00000384433 107 ntBASIC3.59□□□□□ -1.83
CLDN3O15551 RPL31P1-201ENST00000398116 372 ntBASIC3.59□□□□□ -1.83
CLDN3O15551 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN3O15551 FNDC3CP-201ENST00000420795 1155 ntBASIC3.59□□□□□ -1.83
CLDN3O15551 SFR1P2-201ENST00000421841 730 ntBASIC3.59□□□□□ -1.83
CLDN3O15551 GLRXP1-201ENST00000423261 334 ntBASIC3.59□□□□□ -1.83
CLDN3O15551 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN3O15551 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN3O15551 AL590103.1-201ENST00000434488 307 ntBASIC3.59□□□□□ -1.83
CLDN3O15551 RPS7P2-201ENST00000435134 607 ntBASIC3.59□□□□□ -1.83
CLDN3O15551 AC104978.1-201ENST00000449387 391 ntBASIC3.59□□□□□ -1.83
CLDN3O15551 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN3O15551 HMGN2P16-201ENST00000456802 261 ntBASIC3.59□□□□□ -1.83
CLDN3O15551 AC087312.1-201ENST00000471411 480 ntBASIC3.59□□□□□ -1.83
CLDN3O15551 RPS17P11-201ENST00000474297 293 ntBASIC3.59□□□□□ -1.83
CLDN3O15551 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.59□□□□□ -1.83
CLDN3O15551 HMGB1P22-201ENST00000505315 124 ntBASIC3.59□□□□□ -1.83
CLDN3O15551 AC091860.1-201ENST00000505723 432 ntBASIC3.59□□□□□ -1.83
CLDN3O15551 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN3O15551 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN3O15551 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN3O15551 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.59□□□□□ -1.83
CLDN3O15551 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN3O15551 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.59□□□□□ -1.83
CLDN3O15551 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN3O15551 MTATP6P2-201ENST00000603319 678 ntBASIC3.59□□□□□ -1.83
CLDN3O15551 AC103881.1-201ENST00000603476 538 ntBASIC3.59□□□□□ -1.83
CLDN3O15551 AL158211.2-201ENST00000607282 395 ntBASIC3.59□□□□□ -1.83
CLDN3O15551 AL157817.1-201ENST00000614264 790 ntBASIC3.59□□□□□ -1.83
CLDN3O15551 AC009464.1-201ENST00000615731 469 ntBASIC3.59□□□□□ -1.83
CLDN3O15551 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN3O15551 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.84
CLDN3O15551 AC007256.1-201ENST00000392253 2765 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN3O15551 AC130650.2-201ENST00000618736 2403 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CLDN3O15551 RNU6-1249P-201ENST00000363237 111 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 RNU6-207P-201ENST00000384137 107 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 AL139098.1-201ENST00000407291 389 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 RAD23BP2-201ENST00000416003 1207 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 KRR1P1-201ENST00000419430 803 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN3O15551 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.58□□□□□ -1.84
CLDN3O15551 MTCYBP31-201ENST00000438855 1122 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 AC000041.1-201ENST00000439655 175 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN3O15551 SEPT14P24-201ENST00000447236 180 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 RPL7P52-201ENST00000449200 742 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 NPM1P13-201ENST00000452663 865 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 RPS24P6-201ENST00000452670 400 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 HMGB1P15-201ENST00000453854 435 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 AC006539.3-201ENST00000454258 129 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 TRBV26-201ENST00000456572 344 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 snoU13.24-201ENST00000458998 104 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 RPL21P18-201ENST00000469899 480 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN3O15551 RPS4XP22-201ENST00000480755 780 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN3O15551 MTCO2P32-201ENST00000514865 403 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN3O15551 ZNF705CP-201ENST00000530515 889 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.58□□□□□ -1.84
CLDN3O15551 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.58□□□□□ -1.84
CLDN3O15551 CYB5AP5-201ENST00000549779 389 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 AC008507.1-201ENST00000587506 734 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 AP001542.2-201ENST00000593141 364 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 AL606834.2-201ENST00000602954 668 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN3O15551 AC084824.5-201ENST00000612009 413 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 AC093875.1-201ENST00000623688 504 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 MTND2P41-201ENST00000637599 773 ntBASIC3.58□□□□□ -1.84
CLDN3O15551 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN3O15551 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN3O15551 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN3O15551 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN3O15551 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN3O15551 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN3O15551 AC004925.1-201ENST00000624256 2706 ntBASIC3.57□□□□□ -1.84
CLDN3O15551 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN3O15551 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
CLDN3O15551 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN3O15551 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CLDN3O15551 RNA5SP295-201ENST00000362655 121 ntBASIC3.57□□□□□ -1.84
CLDN3O15551 RNA5SP387-201ENST00000364226 106 ntBASIC3.57□□□□□ -1.84
CLDN3O15551 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN3O15551 MTND4LP20-201ENST00000402379 270 ntBASIC3.57□□□□□ -1.84
CLDN3O15551 AP000567.1-201ENST00000406413 156 ntBASIC3.57□□□□□ -1.84
CLDN3O15551 RNA5SP129-201ENST00000410276 118 ntBASIC3.57□□□□□ -1.84
CLDN3O15551 RNA5SP31-201ENST00000411144 127 ntBASIC3.57□□□□□ -1.84
CLDN3O15551 AC063979.1-201ENST00000415539 377 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms