Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 OR6C73P-201ENST00000546432 358 ntBASIC3.45□□□□□ -1.86
MSH4O15457 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.45□□□□□ -1.86
MSH4O15457 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.45□□□□□ -1.86
MSH4O15457 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.45□□□□□ -1.86
MSH4O15457 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.45□□□□□ -1.86
MSH4O15457 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.45□□□□□ -1.86
MSH4O15457 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.45□□□□□ -1.86
MSH4O15457 AC007566.2-201ENST00000603642 413 ntBASIC3.45□□□□□ -1.86
MSH4O15457 AL160281.1-201ENST00000605307 311 ntBASIC3.45□□□□□ -1.86
MSH4O15457 HSPE1P14-201ENST00000605812 302 ntBASIC3.45□□□□□ -1.86
MSH4O15457 AL162274.2-201ENST00000614406 332 ntBASIC3.45□□□□□ -1.86
MSH4O15457 ATP5A1P2-202ENST00000616464 443 ntBASIC3.45□□□□□ -1.86
MSH4O15457 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.45□□□□□ -1.86
MSH4O15457 AL121594.5-201ENST00000631724 573 ntBASIC3.45□□□□□ -1.86
MSH4O15457 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.45□□□□□ -1.86
MSH4O15457 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
MSH4O15457 MTCO1P24-201ENST00000515438 1558 ntBASIC3.45□□□□□ -1.86
MSH4O15457 SRP72P2-201ENST00000344851 1979 ntBASIC3.45□□□□□ -1.86
MSH4O15457 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.44□□□□□ -1.86
MSH4O15457 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
MSH4O15457 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
MSH4O15457 RNU6-207P-201ENST00000384137 107 ntBASIC3.44□□□□□ -1.86
MSH4O15457 Z92545.1-201ENST00000411782 234 ntBASIC3.44□□□□□ -1.86
MSH4O15457 RPL32P35-201ENST00000415214 394 ntBASIC3.44□□□□□ -1.86
MSH4O15457 RPL31P12-201ENST00000422587 358 ntBASIC3.44□□□□□ -1.86
MSH4O15457 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.44□□□□□ -1.86
MSH4O15457 AC234064.1-201ENST00000436312 247 ntBASIC3.44□□□□□ -1.86
MSH4O15457 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.44□□□□□ -1.86
MSH4O15457 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
MSH4O15457 HMGN2P21-201ENST00000447764 270 ntBASIC3.44□□□□□ -1.86
MSH4O15457 RSL24D1P3-201ENST00000449255 495 ntBASIC3.44□□□□□ -1.86
MSH4O15457 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.44□□□□□ -1.86
MSH4O15457 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.44□□□□□ -1.86
MSH4O15457 AL136097.1-201ENST00000456945 913 ntBASIC3.44□□□□□ -1.86
MSH4O15457 RPL23AP14-201ENST00000468281 468 ntBASIC3.44□□□□□ -1.86
MSH4O15457 RPS17P11-201ENST00000474297 293 ntBASIC3.44□□□□□ -1.86
MSH4O15457 RPL5P23-201ENST00000496040 868 ntBASIC3.44□□□□□ -1.86
MSH4O15457 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.44□□□□□ -1.86
MSH4O15457 NDUFB4P9-201ENST00000511646 388 ntBASIC3.44□□□□□ -1.86
MSH4O15457 RNA5SP309-201ENST00000516670 106 ntBASIC3.44□□□□□ -1.86
MSH4O15457 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.44□□□□□ -1.86
MSH4O15457 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.44□□□□□ -1.86
MSH4O15457 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.44□□□□□ -1.86
MSH4O15457 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.44□□□□□ -1.86
MSH4O15457 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.44□□□□□ -1.86
MSH4O15457 BNIP3P19-201ENST00000605397 577 ntBASIC3.44□□□□□ -1.86
MSH4O15457 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
MSH4O15457 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
MSH4O15457 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
MSH4O15457 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.44□□□□□ -1.86
MSH4O15457 RIOK3P1-201ENST00000418778 1528 ntBASIC3.44□□□□□ -1.86
MSH4O15457 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
MSH4O15457 SGO1P1-201ENST00000603525 1447 ntBASIC3.44□□□□□ -1.86
MSH4O15457 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
MSH4O15457 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.43□□□□□ -1.86
MSH4O15457 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.43□□□□□ -1.86
MSH4O15457 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
MSH4O15457 RPL23AP57-201ENST00000332361 466 ntBASIC3.43□□□□□ -1.86
MSH4O15457 RNA5SP383-201ENST00000362934 120 ntBASIC3.43□□□□□ -1.86
MSH4O15457 RNU6-353P-201ENST00000364266 108 ntBASIC3.43□□□□□ -1.86
MSH4O15457 U3.11-201ENST00000364476 212 ntBASIC3.43□□□□□ -1.86
MSH4O15457 SNORA71.1-201ENST00000364523 117 ntBASIC3.43□□□□□ -1.86
MSH4O15457 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
MSH4O15457 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.43□□□□□ -1.86
MSH4O15457 MIR16-1-201ENST00000385271 89 ntBASIC3.43□□□□□ -1.86
MSH4O15457 AL138885.1-201ENST00000405921 675 ntBASIC3.43□□□□□ -1.86
MSH4O15457 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.43□□□□□ -1.86
MSH4O15457 UBE2V1P9-201ENST00000414760 368 ntBASIC3.43□□□□□ -1.86
MSH4O15457 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.43□□□□□ -1.86
MSH4O15457 RPS3AP9-201ENST00000417027 792 ntBASIC3.43□□□□□ -1.86
MSH4O15457 AC005517.2-201ENST00000424673 553 ntBASIC3.43□□□□□ -1.86
MSH4O15457 RPP40P1-201ENST00000426762 456 ntBASIC3.43□□□□□ -1.86
MSH4O15457 AP000949.1-201ENST00000438328 629 ntBASIC3.43□□□□□ -1.86
MSH4O15457 AC000041.1-201ENST00000439655 175 ntBASIC3.43□□□□□ -1.86
MSH4O15457 HMGB3P6-201ENST00000444896 598 ntBASIC3.43□□□□□ -1.86
MSH4O15457 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.43□□□□□ -1.86
MSH4O15457 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.43□□□□□ -1.86
MSH4O15457 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.43□□□□□ -1.86
MSH4O15457 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.43□□□□□ -1.86
MSH4O15457 RPS29P2-201ENST00000479278 136 ntBASIC3.43□□□□□ -1.86
MSH4O15457 AC078817.1-201ENST00000492623 435 ntBASIC3.43□□□□□ -1.86
MSH4O15457 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.43□□□□□ -1.86
MSH4O15457 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
MSH4O15457 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
MSH4O15457 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
MSH4O15457 NAMPTP2-201ENST00000505629 1115 ntBASIC3.43□□□□□ -1.86
MSH4O15457 AC119751.1-201ENST00000513357 765 ntBASIC3.43□□□□□ -1.86
MSH4O15457 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.43□□□□□ -1.86
MSH4O15457 MTCO3P27-201ENST00000514397 196 ntBASIC3.43□□□□□ -1.86
MSH4O15457 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
MSH4O15457 AC009812.2-201ENST00000517657 457 ntBASIC3.43□□□□□ -1.86
MSH4O15457 AP003355.1-201ENST00000518956 587 ntBASIC3.43□□□□□ -1.86
MSH4O15457 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.43□□□□□ -1.86
MSH4O15457 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.43□□□□□ -1.86
MSH4O15457 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.43□□□□□ -1.86
MSH4O15457 AC006518.2-201ENST00000542513 940 ntBASIC3.43□□□□□ -1.86
MSH4O15457 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
MSH4O15457 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.43□□□□□ -1.86
MSH4O15457 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.43□□□□□ -1.86
MSH4O15457 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms