Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 NUTF2P8-201ENST00000604593 363 ntBASIC2.33□□□□□ -2.04
HMGB3O15347 AC135178.6-201ENST00000605314 398 ntBASIC2.33□□□□□ -2.04
HMGB3O15347 AC009570.1-201ENST00000609599 745 ntBASIC2.33□□□□□ -2.04
HMGB3O15347 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
HMGB3O15347 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.33□□□□□ -2.04
HMGB3O15347 AC010435.1-201ENST00000623353 1177 ntBASIC2.33□□□□□ -2.04
HMGB3O15347 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC2.33□□□□□ -2.04
HMGB3O15347 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC2.33□□□□□ -2.04
HMGB3O15347 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
HMGB3O15347 AC099654.7-201ENST00000635788 2127 ntBASIC2.33□□□□□ -2.04
HMGB3O15347 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HMGB3O15347 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HMGB3O15347 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
HMGB3O15347 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.33□□□□□ -2.04
HMGB3O15347 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
HMGB3O15347 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HMGB3O15347 TANK-205ENST00000405852 2155 ntTSL 5 BASIC2.32□□□□□ -2.04
HMGB3O15347 RNA5SP124-201ENST00000362739 110 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 RNU6-374P-201ENST00000364146 108 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 SNORA9.2-201ENST00000365361 133 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 AL356057.2-201ENST00000403318 432 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 U3.42-201ENST00000408746 214 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 METTL5-204ENST00000409340 472 ntTSL 5 BASIC2.32□□□□□ -2.04
HMGB3O15347 HMGN2P35-201ENST00000412164 270 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.32□□□□□ -2.04
HMGB3O15347 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.32□□□□□ -2.04
HMGB3O15347 RNF19BPX-201ENST00000426224 625 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 RSL24D1P6-201ENST00000426934 401 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 C4BPAP2-201ENST00000428434 478 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 AC073508.1-201ENST00000428866 656 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 AC005189.1-201ENST00000431286 310 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.32□□□□□ -2.04
HMGB3O15347 RPS12P2-201ENST00000439728 269 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 AL513321.1-201ENST00000441175 761 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.32□□□□□ -2.04
HMGB3O15347 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.32□□□□□ -2.04
HMGB3O15347 AC016696.1-201ENST00000446949 318 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 AC234775.1-201ENST00000454247 670 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 AC015908.1-201ENST00000478739 476 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 RNF138P1-201ENST00000502765 546 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 AIG1P1-201ENST00000503376 148 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.32□□□□□ -2.04
HMGB3O15347 AP003385.6-201ENST00000531603 374 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.32□□□□□ -2.04
HMGB3O15347 AC128657.1-201ENST00000549459 145 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.32□□□□□ -2.04
HMGB3O15347 AL121603.1-201ENST00000553815 142 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC2.32□□□□□ -2.04
HMGB3O15347 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.32□□□□□ -2.04
HMGB3O15347 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.32□□□□□ -2.04
HMGB3O15347 XIAPP1-201ENST00000603162 600 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 AC067959.1-201ENST00000604334 379 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 AC106791.2-201ENST00000604680 391 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 AL138880.2-201ENST00000616214 239 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.32□□□□□ -2.04
HMGB3O15347 VN1R7P-201ENST00000619242 903 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.32□□□□□ -2.04
HMGB3O15347 AC099506.2-201ENST00000623074 221 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.32□□□□□ -2.04
HMGB3O15347 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.32□□□□□ -2.04
HMGB3O15347 AC244258.1-201ENST00000637553 1071 ntBASIC2.32□□□□□ -2.04
HMGB3O15347 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
HMGB3O15347 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.32□□□□□ -2.04
HMGB3O15347 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.32□□□□□ -2.04
HMGB3O15347 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
HMGB3O15347 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.32□□□□□ -2.04
HMGB3O15347 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HMGB3O15347 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.32□□□□□ -2.04
HMGB3O15347 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.31□□□□□ -2.04
HMGB3O15347 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
HMGB3O15347 AC073325.2-201ENST00000339545 159 ntBASIC2.31□□□□□ -2.04
HMGB3O15347 RNU1-35P-201ENST00000362782 153 ntBASIC2.31□□□□□ -2.04
HMGB3O15347 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
HMGB3O15347 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.31□□□□□ -2.04
HMGB3O15347 SNORA56-201ENST00000383966 129 ntBASIC2.31□□□□□ -2.04
HMGB3O15347 MT-TC-201ENST00000387405 66 ntBASIC2.31□□□□□ -2.04
HMGB3O15347 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
HMGB3O15347 DSTNP4-201ENST00000399472 474 ntBASIC2.31□□□□□ -2.04
HMGB3O15347 AC025750.1-201ENST00000399891 379 ntBASIC2.31□□□□□ -2.04
HMGB3O15347 MTND4P13-201ENST00000402078 1023 ntBASIC2.31□□□□□ -2.04
HMGB3O15347 RNU4-78P-201ENST00000410940 126 ntBASIC2.31□□□□□ -2.04
HMGB3O15347 SYF2P2-201ENST00000417620 583 ntBASIC2.31□□□□□ -2.04
HMGB3O15347 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.31□□□□□ -2.04
HMGB3O15347 DUTP6-201ENST00000425573 462 ntBASIC2.31□□□□□ -2.04
HMGB3O15347 AC006548.1-201ENST00000427470 102 ntBASIC2.31□□□□□ -2.04
HMGB3O15347 OR51B8P-201ENST00000449892 769 ntBASIC2.31□□□□□ -2.04
HMGB3O15347 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.31□□□□□ -2.04
HMGB3O15347 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.31□□□□□ -2.04
HMGB3O15347 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.31□□□□□ -2.04
HMGB3O15347 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.31□□□□□ -2.04
HMGB3O15347 AC008155.2-201ENST00000464337 397 ntBASIC2.31□□□□□ -2.04
HMGB3O15347 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.31□□□□□ -2.04
HMGB3O15347 RN7SKP272-201ENST00000516988 232 ntBASIC2.31□□□□□ -2.04
HMGB3O15347 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.31□□□□□ -2.04
HMGB3O15347 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC2.31□□□□□ -2.04
HMGB3O15347 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.31□□□□□ -2.04
HMGB3O15347 AL391156.1-201ENST00000554965 554 ntBASIC2.31□□□□□ -2.04
HMGB3O15347 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.31□□□□□ -2.04
HMGB3O15347 MIR5092-201ENST00000583139 88 ntBASIC2.31□□□□□ -2.04
HMGB3O15347 UBL5P2-201ENST00000583788 219 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms