Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.51□□□□□ -1.85
CHD2O14647 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.51□□□□□ -1.85
CHD2O14647 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.51□□□□□ -1.85
CHD2O14647 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.51□□□□□ -1.85
CHD2O14647 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.51□□□□□ -1.85
CHD2O14647 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC3.51□□□□□ -1.85
CHD2O14647 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.51□□□□□ -1.85
CHD2O14647 AC009950.2-201ENST00000636548 183 ntBASIC3.51□□□□□ -1.85
CHD2O14647 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.51□□□□□ -1.85
CHD2O14647 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHD2O14647 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CHD2O14647 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
CHD2O14647 AC138915.3-201ENST00000562908 1389 ntBASIC3.51□□□□□ -1.85
CHD2O14647 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHD2O14647 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHD2O14647 MIR181B1-201ENST00000385240 110 ntBASIC3.51□□□□□ -1.85
CHD2O14647 MIR92A2-201ENST00000385299 75 ntBASIC3.51□□□□□ -1.85
CHD2O14647 TRGV6-201ENST00000417928 299 ntBASIC3.51□□□□□ -1.85
CHD2O14647 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.51□□□□□ -1.85
CHD2O14647 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.51□□□□□ -1.85
CHD2O14647 OR6C72P-201ENST00000451403 892 ntBASIC3.51□□□□□ -1.85
CHD2O14647 RPL30P9-201ENST00000465586 330 ntBASIC3.51□□□□□ -1.85
CHD2O14647 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.51□□□□□ -1.85
CHD2O14647 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.51□□□□□ -1.85
CHD2O14647 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.51□□□□□ -1.85
CHD2O14647 AC006254.3-201ENST00000603353 884 ntBASIC3.51□□□□□ -1.85
CHD2O14647 U4.3-201ENST00000621047 82 ntBASIC3.51□□□□□ -1.85
CHD2O14647 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CHD2O14647 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHD2O14647 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC3.51□□□□□ -1.85
CHD2O14647 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CHD2O14647 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.5□□□□□ -1.85
CHD2O14647 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.5□□□□□ -1.85
CHD2O14647 AC010733.2-201ENST00000589496 5702 ntBASIC3.5□□□□□ -1.85
CHD2O14647 AC104454.1-201ENST00000421341 1401 ntBASIC3.5□□□□□ -1.85
CHD2O14647 Z73965.1-201ENST00000623412 2297 ntBASIC3.5□□□□□ -1.85
CHD2O14647 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CHD2O14647 AC069218.2-201ENST00000411665 344 ntBASIC3.5□□□□□ -1.85
CHD2O14647 AC093151.1-201ENST00000427711 313 ntBASIC3.5□□□□□ -1.85
CHD2O14647 MTCO3P17-201ENST00000443775 513 ntBASIC3.5□□□□□ -1.85
CHD2O14647 AC069277.2-201ENST00000454211 432 ntBASIC3.5□□□□□ -1.85
CHD2O14647 RN7SL283P-201ENST00000489055 303 ntBASIC3.5□□□□□ -1.85
CHD2O14647 RNU4-18P-201ENST00000516751 149 ntBASIC3.5□□□□□ -1.85
CHD2O14647 AL355836.1-201ENST00000555951 870 ntBASIC3.5□□□□□ -1.85
CHD2O14647 HMGB3P26-201ENST00000560051 582 ntBASIC3.5□□□□□ -1.85
CHD2O14647 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.5□□□□□ -1.85
CHD2O14647 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.5□□□□□ -1.85
CHD2O14647 AC012119.1-201ENST00000603184 222 ntBASIC3.5□□□□□ -1.85
CHD2O14647 PSMA6P4-201ENST00000603247 718 ntBASIC3.5□□□□□ -1.85
CHD2O14647 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CHD2O14647 MTND5P27-201ENST00000428871 1720 ntBASIC3.5□□□□□ -1.85
CHD2O14647 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CHD2O14647 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.49□□□□□ -1.85
CHD2O14647 EIF2S2P4-201ENST00000461070 984 ntBASIC3.49□□□□□ -1.85
CHD2O14647 RNA5SP458-201ENST00000516188 119 ntBASIC3.49□□□□□ -1.85
CHD2O14647 SNORD116-30-201ENST00000516468 85 ntBASIC3.49□□□□□ -1.85
CHD2O14647 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.49□□□□□ -1.85
CHD2O14647 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CHD2O14647 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CHD2O14647 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CHD2O14647 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CHD2O14647 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CHD2O14647 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CHD2O14647 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CHD2O14647 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CHD2O14647 RPL31P53-201ENST00000457065 348 ntBASIC3.49□□□□□ -1.85
CHD2O14647 AC068587.2-201ENST00000478386 781 ntBASIC3.49□□□□□ -1.85
CHD2O14647 AC092185.1-201ENST00000491371 97 ntBASIC3.49□□□□□ -1.85
CHD2O14647 AC092436.1-201ENST00000506450 503 ntBASIC3.49□□□□□ -1.85
CHD2O14647 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.49□□□□□ -1.85
CHD2O14647 RNA5SP76-201ENST00000516277 87 ntBASIC3.49□□□□□ -1.85
CHD2O14647 AC068714.1-201ENST00000559623 800 ntBASIC3.49□□□□□ -1.85
CHD2O14647 AC069234.5-201ENST00000611056 416 ntBASIC3.49□□□□□ -1.85
CHD2O14647 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.49□□□□□ -1.85
CHD2O14647 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.48□□□□□ -1.85
CHD2O14647 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.48□□□□□ -1.85
CHD2O14647 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CHD2O14647 MIR181A2-201ENST00000384863 110 ntBASIC3.48□□□□□ -1.85
CHD2O14647 AL451074.5-201ENST00000415894 435 ntBASIC3.48□□□□□ -1.85
CHD2O14647 SEC63P1-201ENST00000425785 1258 ntBASIC3.48□□□□□ -1.85
CHD2O14647 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.48□□□□□ -1.85
CHD2O14647 RWDD4P2-201ENST00000426392 563 ntBASIC3.48□□□□□ -1.85
CHD2O14647 AL031736.2-201ENST00000426573 787 ntBASIC3.48□□□□□ -1.85
CHD2O14647 MTCYBP29-201ENST00000436327 1006 ntBASIC3.48□□□□□ -1.85
CHD2O14647 AL357520.1-201ENST00000441557 453 ntBASIC3.48□□□□□ -1.85
CHD2O14647 HMGB1P15-201ENST00000453854 435 ntBASIC3.48□□□□□ -1.85
CHD2O14647 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.48□□□□□ -1.85
CHD2O14647 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.48□□□□□ -1.85
CHD2O14647 RWDD4P1-201ENST00000488019 565 ntBASIC3.48□□□□□ -1.85
CHD2O14647 RPL9P6-201ENST00000492764 598 ntBASIC3.48□□□□□ -1.85
CHD2O14647 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC3.48□□□□□ -1.85
CHD2O14647 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.48□□□□□ -1.85
CHD2O14647 AC044913.1-201ENST00000557200 430 ntBASIC3.48□□□□□ -1.85
CHD2O14647 AC017076.1-201ENST00000607613 578 ntBASIC3.48□□□□□ -1.85
CHD2O14647 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.48□□□□□ -1.85
CHD2O14647 PISRT1-201ENST00000626175 531 ntBASIC3.48□□□□□ -1.85
CHD2O14647 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.48□□□□□ -1.85
CHD2O14647 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.48□□□□□ -1.85
CHD2O14647 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.48□□□□□ -1.85
CHD2O14647 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms