Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC090525.1-201ENST00000479116 478 ntBASIC4.68□□□□□ -1.66
CUX2O14529 AC074029.2-201ENST00000551045 634 ntBASIC4.68□□□□□ -1.66
CUX2O14529 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.68□□□□□ -1.66
CUX2O14529 ISCA1P3-201ENST00000577104 373 ntBASIC4.68□□□□□ -1.66
CUX2O14529 AC023813.4-201ENST00000607580 580 ntBASIC4.68□□□□□ -1.66
CUX2O14529 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.68□□□□□ -1.66
CUX2O14529 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.68□□□□□ -1.66
CUX2O14529 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.68□□□□□ -1.66
CUX2O14529 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.68□□□□□ -1.66
CUX2O14529 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.67□□□□□ -1.66
CUX2O14529 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CUX2O14529 TAB3P1-202ENST00000452645 1634 ntBASIC4.67□□□□□ -1.66
CUX2O14529 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CUX2O14529 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CUX2O14529 MIR518C-201ENST00000384822 101 ntBASIC4.67□□□□□ -1.66
CUX2O14529 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CUX2O14529 HMGB3P23-201ENST00000414981 585 ntBASIC4.67□□□□□ -1.66
CUX2O14529 AL353898.1-201ENST00000444055 238 ntBASIC4.67□□□□□ -1.66
CUX2O14529 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.67□□□□□ -1.66
CUX2O14529 AC106872.2-201ENST00000494303 480 ntBASIC4.67□□□□□ -1.66
CUX2O14529 PRELID3BP7-201ENST00000503606 469 ntBASIC4.67□□□□□ -1.66
CUX2O14529 RNA5SP320-201ENST00000516263 124 ntBASIC4.67□□□□□ -1.66
CUX2O14529 AC023043.2-201ENST00000589678 1026 ntBASIC4.67□□□□□ -1.66
CUX2O14529 AC245128.3-201ENST00000594721 748 ntBASIC4.67□□□□□ -1.66
CUX2O14529 AC104237.2-201ENST00000612456 443 ntBASIC4.67□□□□□ -1.66
CUX2O14529 AP002967.1-201ENST00000624203 539 ntBASIC4.67□□□□□ -1.66
CUX2O14529 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CUX2O14529 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.67□□□□□ -1.66
CUX2O14529 AC006020.1-201ENST00000420179 1854 ntBASIC4.67□□□□□ -1.66
CUX2O14529 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4.67□□□□□ -1.66
CUX2O14529 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CUX2O14529 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CUX2O14529 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.66□□□□□ -1.66
CUX2O14529 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CUX2O14529 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CUX2O14529 U3.6-201ENST00000363622 211 ntBASIC4.66□□□□□ -1.66
CUX2O14529 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CUX2O14529 AL590084.1-201ENST00000407885 387 ntBASIC4.66□□□□□ -1.66
CUX2O14529 RNA5SP107-201ENST00000411358 122 ntBASIC4.66□□□□□ -1.66
CUX2O14529 AC245291.1-201ENST00000419501 328 ntBASIC4.66□□□□□ -1.66
CUX2O14529 PTP4A1P5-201ENST00000420305 455 ntBASIC4.66□□□□□ -1.66
CUX2O14529 Z99127.2-201ENST00000441426 334 ntBASIC4.66□□□□□ -1.66
CUX2O14529 AL035551.1-201ENST00000446931 348 ntBASIC4.66□□□□□ -1.66
CUX2O14529 RN7SL330P-201ENST00000469709 307 ntBASIC4.66□□□□□ -1.66
CUX2O14529 AC055855.1-201ENST00000489563 579 ntBASIC4.66□□□□□ -1.66
CUX2O14529 AC005921.1-201ENST00000510589 286 ntBASIC4.66□□□□□ -1.66
CUX2O14529 AC034244.2-201ENST00000514668 858 ntBASIC4.66□□□□□ -1.66
CUX2O14529 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.66□□□□□ -1.66
CUX2O14529 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.66□□□□□ -1.66
CUX2O14529 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.66□□□□□ -1.66
CUX2O14529 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CUX2O14529 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CUX2O14529 RNA5SP383-201ENST00000362934 120 ntBASIC4.65□□□□□ -1.66
CUX2O14529 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CUX2O14529 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CUX2O14529 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.65□□□□□ -1.66
CUX2O14529 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.65□□□□□ -1.66
CUX2O14529 AL121882.1-201ENST00000422893 417 ntBASIC4.65□□□□□ -1.66
CUX2O14529 MTND2P2-201ENST00000434633 945 ntBASIC4.65□□□□□ -1.66
CUX2O14529 AC096638.1-201ENST00000444678 216 ntBASIC4.65□□□□□ -1.66
CUX2O14529 HIGD1AP2-201ENST00000446367 280 ntBASIC4.65□□□□□ -1.66
CUX2O14529 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.65□□□□□ -1.66
CUX2O14529 AC008716.1-201ENST00000511084 513 ntBASIC4.65□□□□□ -1.66
CUX2O14529 SCARNA17.1-201ENST00000516211 143 ntBASIC4.65□□□□□ -1.66
CUX2O14529 SCARNA17.2-201ENST00000516334 143 ntBASIC4.65□□□□□ -1.66
CUX2O14529 SNORA64.4-201ENST00000516632 81 ntBASIC4.65□□□□□ -1.66
CUX2O14529 NPM1P35-201ENST00000533043 868 ntBASIC4.65□□□□□ -1.66
CUX2O14529 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.65□□□□□ -1.66
CUX2O14529 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.65□□□□□ -1.66
CUX2O14529 SCARNA17.4-201ENST00000614296 143 ntBASIC4.65□□□□□ -1.66
CUX2O14529 AP003499.2-201ENST00000624100 483 ntBASIC4.65□□□□□ -1.66
CUX2O14529 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CUX2O14529 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CUX2O14529 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
CUX2O14529 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CUX2O14529 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CUX2O14529 RNU6-253P-201ENST00000384730 105 ntBASIC4.64□□□□□ -1.67
CUX2O14529 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.64□□□□□ -1.67
CUX2O14529 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.64□□□□□ -1.67
CUX2O14529 MTCO1P52-201ENST00000433928 531 ntBASIC4.64□□□□□ -1.67
CUX2O14529 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.64□□□□□ -1.67
CUX2O14529 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CUX2O14529 MTCYBP12-201ENST00000440559 1134 ntBASIC4.64□□□□□ -1.67
CUX2O14529 AC021146.7-201ENST00000509604 775 ntBASIC4.64□□□□□ -1.67
CUX2O14529 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CUX2O14529 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CUX2O14529 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.64□□□□□ -1.67
CUX2O14529 AP001005.3-201ENST00000622049 129 ntBASIC4.64□□□□□ -1.67
CUX2O14529 SNORA64-201ENST00000384674 134 ntBASIC4.63□□□□□ -1.67
CUX2O14529 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CUX2O14529 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.63□□□□□ -1.67
CUX2O14529 RPL32P35-201ENST00000415214 394 ntBASIC4.63□□□□□ -1.67
CUX2O14529 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.63□□□□□ -1.67
CUX2O14529 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.63□□□□□ -1.67
CUX2O14529 AP002345.1-201ENST00000456493 928 ntBASIC4.63□□□□□ -1.67
CUX2O14529 AC126121.1-201ENST00000482313 553 ntBASIC4.63□□□□□ -1.67
CUX2O14529 MTND4P2-201ENST00000507767 1203 ntBASIC4.63□□□□□ -1.67
CUX2O14529 TXNP6-201ENST00000510190 310 ntBASIC4.63□□□□□ -1.67
CUX2O14529 DLEU2_6.1-201ENST00000610536 112 ntBASIC4.63□□□□□ -1.67
CUX2O14529 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 233.2 ms