Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 UBDP1-202ENST00000457888 382 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 AC010468.1-201ENST00000461022 817 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC188H7C350 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC188H7C350 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC188H7C350 AC004062.1-201ENST00000509926 645 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 AC116353.3-201ENST00000511215 249 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC188H7C350 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC188H7C350 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC188H7C350 RN7SKP122-201ENST00000515923 296 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 SCARNA14-201ENST00000516903 136 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.76□□□□□ -1.81
CCDC188H7C350 MED28P5-201ENST00000528254 438 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC188H7C350 AC026333.2-201ENST00000542164 106 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC188H7C350 AL121603.1-201ENST00000553815 142 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 AC012182.1-201ENST00000570133 895 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC188H7C350 OR4K7P-201ENST00000580232 945 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 MIR4637-201ENST00000582405 84 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.76□□□□□ -1.81
CCDC188H7C350 AC103881.1-201ENST00000603476 538 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 DUXAP3-201ENST00000603616 594 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC188H7C350 AC006077.1-201ENST00000604746 343 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 AC092653.1-201ENST00000608509 531 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC188H7C350 MLECP1-201ENST00000615893 709 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 AC006963.1-201ENST00000624003 1052 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 AC112484.5-201ENST00000624189 228 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 AC231657.1-201ENST00000624313 397 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
CCDC188H7C350 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC188H7C350 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC188H7C350 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC188H7C350 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC188H7C350 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC188H7C350 AC007656.2-201ENST00000624902 4547 ntBASIC3.76□□□□□ -1.81
CCDC188H7C350 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC188H7C350 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC188H7C350 AC024560.2-201ENST00000507981 1497 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC188H7C350 RNU4-92P-201ENST00000363783 136 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 RNU6-629P-201ENST00000384061 103 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 ANAPC10P1-201ENST00000395991 556 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 AL022722.2-201ENST00000402519 180 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 RNU6-712P-201ENST00000410558 100 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC188H7C350 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC188H7C350 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC188H7C350 PSMA6P3-201ENST00000428242 164 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 MTND2P5-201ENST00000432656 1006 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC188H7C350 MTND4P6-201ENST00000438297 472 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC188H7C350 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC188H7C350 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC188H7C350 MTCO3P11-201ENST00000455103 774 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 BTF3P5-201ENST00000457252 467 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 RPS4XP2-201ENST00000458402 793 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 AC021205.2-201ENST00000480069 347 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 RPS4XP22-201ENST00000480755 780 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 TRAV31-201ENST00000502780 342 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC188H7C350 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC188H7C350 XKRY-201ENST00000510392 1100 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC188H7C350 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC188H7C350 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC188H7C350 RNU6-583P-201ENST00000516012 92 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 RNU6-311P-201ENST00000516224 102 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 RNY4P37-201ENST00000516225 96 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC188H7C350 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.75□□□□□ -1.81
CCDC188H7C350 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC188H7C350 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC188H7C350 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC188H7C350 EEF1B2P4-201ENST00000551398 348 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 DUXAP6-201ENST00000553858 601 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC188H7C350 AC090695.1-201ENST00000561269 1222 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.75□□□□□ -1.81
CCDC188H7C350 MIR5186-201ENST00000577504 120 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 XIAPP1-201ENST00000603162 600 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.75□□□□□ -1.81
CCDC188H7C350 AC023043.4-201ENST00000612081 449 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 AC107075.1-201ENST00000613695 314 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 AL050303.3-201ENST00000613704 284 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC188H7C350 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CCDC188H7C350 AC048347.1-201ENST00000624621 427 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC188H7C350 MIR4278-201ENST00000636094 69 ntBASIC3.75□□□□□ -1.81
CCDC188H7C350 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC188H7C350 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC188H7C350 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC188H7C350 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms