Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 TRIM60P18-201ENST00000441518 828 ntBASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 AC104435.1-201ENST00000483483 166 ntBASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 AC078918.1-201ENST00000498515 228 ntBASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 AC109329.2-201ENST00000519658 482 ntBASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 AC231759.1-201ENST00000616455 597 ntBASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 CTSLP2-204ENST00000629029 392 ntBASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 AL121594.5-201ENST00000631724 573 ntBASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 AC008432.1-201ENST00000615912 1320 ntBASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 MTND5P12-201ENST00000502851 1449 ntBASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 SYT14P1-202ENST00000600441 1448 ntBASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CPSF4LA6NMK7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 OR4K6P-201ENST00000416478 897 ntBASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 SSXP9-201ENST00000417503 292 ntBASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 AC073069.1-201ENST00000428657 441 ntBASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 HIGD1AP11-201ENST00000438361 280 ntBASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 AL353093.1-201ENST00000441292 436 ntBASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 MTND6P32-201ENST00000457611 483 ntBASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 HIGD1AP3-201ENST00000515857 278 ntBASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 RNA5SP281-201ENST00000516504 135 ntBASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 AP001646.1-201ENST00000527936 915 ntBASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 LRRC37A5P-203ENST00000580181 585 ntBASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 AL390838.2-201ENST00000602394 274 ntBASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 AL049844.2-201ENST00000604280 628 ntBASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 AC026790.2-201ENST00000606282 430 ntBASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 AL159169.2-201ENST00000610061 1269 ntBASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.04□□□□□ -2.08
CPSF4LA6NMK7 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.03□□□□□ -2.08
CPSF4LA6NMK7 AL136360.1-201ENST00000503377 1900 ntBASIC2.03□□□□□ -2.08
CPSF4LA6NMK7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.03□□□□□ -2.08
CPSF4LA6NMK7 AC012321.1-201ENST00000561622 1588 ntBASIC2.03□□□□□ -2.08
CPSF4LA6NMK7 AL512283.1-201ENST00000606756 1384 ntBASIC2.03□□□□□ -2.08
CPSF4LA6NMK7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.03□□□□□ -2.08
CPSF4LA6NMK7 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CPSF4LA6NMK7 RNU6-146P-201ENST00000384602 108 ntBASIC2.03□□□□□ -2.08
CPSF4LA6NMK7 SNORA67.4-201ENST00000384688 142 ntBASIC2.03□□□□□ -2.08
CPSF4LA6NMK7 MIR221-201ENST00000385135 110 ntBASIC2.03□□□□□ -2.08
CPSF4LA6NMK7 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CPSF4LA6NMK7 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.03□□□□□ -2.08
CPSF4LA6NMK7 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.03□□□□□ -2.08
CPSF4LA6NMK7 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.03□□□□□ -2.08
CPSF4LA6NMK7 GZMAP1-201ENST00000503054 631 ntBASIC2.03□□□□□ -2.08
CPSF4LA6NMK7 AC107222.1-201ENST00000510899 637 ntBASIC2.03□□□□□ -2.08
CPSF4LA6NMK7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CPSF4LA6NMK7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.03□□□□□ -2.08
CPSF4LA6NMK7 DNAJC19P3-201ENST00000594491 331 ntBASIC2.03□□□□□ -2.08
CPSF4LA6NMK7 AC013562.2-201ENST00000611632 603 ntBASIC2.03□□□□□ -2.08
CPSF4LA6NMK7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
CPSF4LA6NMK7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
CPSF4LA6NMK7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
CPSF4LA6NMK7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.02□□□□□ -2.09
CPSF4LA6NMK7 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CPSF4LA6NMK7 AC010329.2-201ENST00000595195 2737 ntBASIC2.02□□□□□ -2.09
CPSF4LA6NMK7 RNA5SP289-201ENST00000362332 137 ntBASIC2.02□□□□□ -2.09
CPSF4LA6NMK7 AL122016.1-201ENST00000403365 367 ntBASIC2.02□□□□□ -2.09
CPSF4LA6NMK7 HMGB1P11-201ENST00000413899 637 ntBASIC2.02□□□□□ -2.09
CPSF4LA6NMK7 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.02□□□□□ -2.09
CPSF4LA6NMK7 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.02□□□□□ -2.09
CPSF4LA6NMK7 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
CPSF4LA6NMK7 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.02□□□□□ -2.09
CPSF4LA6NMK7 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.02□□□□□ -2.09
CPSF4LA6NMK7 HSPE1P28-201ENST00000443139 211 ntBASIC2.02□□□□□ -2.09
CPSF4LA6NMK7 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.02□□□□□ -2.09
CPSF4LA6NMK7 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.02□□□□□ -2.09
CPSF4LA6NMK7 AC004263.1-201ENST00000479327 332 ntBASIC2.02□□□□□ -2.09
CPSF4LA6NMK7 AC006483.1-201ENST00000487308 313 ntBASIC2.02□□□□□ -2.09
CPSF4LA6NMK7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.02□□□□□ -2.09
CPSF4LA6NMK7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.02□□□□□ -2.09
CPSF4LA6NMK7 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CPSF4LA6NMK7 AC106782.4-201ENST00000568264 210 ntBASIC2.02□□□□□ -2.09
CPSF4LA6NMK7 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.02□□□□□ -2.09
CPSF4LA6NMK7 AC009831.4-201ENST00000620744 325 ntBASIC2.02□□□□□ -2.09
CPSF4LA6NMK7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.02□□□□□ -2.09
CPSF4LA6NMK7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CPSF4LA6NMK7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CPSF4LA6NMK7 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CPSF4LA6NMK7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CPSF4LA6NMK7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CPSF4LA6NMK7 GABPAP-201ENST00000419271 1356 ntBASIC2.01□□□□□ -2.09
CPSF4LA6NMK7 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.01□□□□□ -2.09
CPSF4LA6NMK7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
CPSF4LA6NMK7 SNORA36C-201ENST00000384289 132 ntBASIC2.01□□□□□ -2.09
CPSF4LA6NMK7 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.01□□□□□ -2.09
CPSF4LA6NMK7 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms