Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 MIR4277-201ENST00000578298 84 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 RN7SL600P-201ENST00000581811 299 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 MIR5096-201ENST00000583713 70 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 MIR3138-201ENST00000585238 82 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 BNIP3P23-201ENST00000599655 511 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 AC079089.3-201ENST00000603094 673 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 PRELID3BP8-201ENST00000604148 295 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 AC103710.4-201ENST00000609301 899 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 MIR6730-201ENST00000622213 67 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 AC004009.2-201ENST00000623016 728 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 MIR3653-201ENST00000625572 110 ntBASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TCRBV7S3A2A0A539 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
TCRBV7S3A2A0A539 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
TCRBV7S3A2A0A539 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 MIR383-201ENST00000362257 73 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 RNU6-289P-201ENST00000364093 107 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 RNU6-343P-201ENST00000364709 104 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 RNU6-769P-201ENST00000384407 104 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 RNU6-878P-201ENST00000384578 110 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 MIR585-201ENST00000384887 94 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 RPL31P1-201ENST00000398116 372 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 RNU2-16P-201ENST00000410712 136 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 RPL21P32-201ENST00000419877 477 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 OFD1P18Y-201ENST00000420889 959 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 AC068287.1-201ENST00000430283 295 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 ZNF33CP-201ENST00000432492 2030 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 RSU1P2-202ENST00000437884 485 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 MTND6P18-201ENST00000439477 513 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 AL356535.1-201ENST00000440335 398 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 RPL7P31-201ENST00000450192 724 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 DNAJC19P1-201ENST00000455312 319 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 BX322784.1-201ENST00000455793 1077 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 SNRPFP4-201ENST00000456366 242 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 CFTRP1-201ENST00000456646 183 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 AC017015.1-201ENST00000477387 286 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 RN7SL604P-201ENST00000492589 296 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 AC026726.1-201ENST00000512859 601 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 AC025881.1-201ENST00000518851 512 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 AC013828.2-201ENST00000532487 235 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 AL360157.1-201ENST00000565962 87 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 MIR4307-201ENST00000582802 84 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 AL353997.4-201ENST00000586196 166 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 AC078795.2-201ENST00000602835 1252 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 AL136363.2-201ENST00000604173 851 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 AC090116.1-201ENST00000615679 446 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 AL359715.5-201ENST00000623431 443 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 AC084035.1-201ENST00000634543 607 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 MIR4496-201ENST00000635896 61 ntBASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.08□□□□□ -1.76
TCRBV7S3A2A0A539 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 BDP1P-201ENST00000582658 1990 ntBASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
TCRBV7S3A2A0A539 AL359893.1-201ENST00000447628 1580 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms