Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 MIR124-3-201ENST00000384866 87 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 MT-TC-201ENST00000387405 66 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AL590084.2-201ENST00000401481 382 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 DHFRP6-201ENST00000401776 268 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AL356131.1-201ENST00000405826 414 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 MIR1183-201ENST00000408856 89 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 PTP4A1P5-201ENST00000420305 455 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AC011233.1-201ENST00000422812 283 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 ART2BP-201ENST00000453501 499 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 snoU13.3-201ENST00000459441 104 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 NDUFA5P9-201ENST00000472609 340 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 RPS3AP50-201ENST00000487064 803 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AC093281.2-201ENST00000510153 597 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AC119751.5-201ENST00000514077 770 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AC025884.1-201ENST00000556034 378 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AC006960.3-201ENST00000561845 705 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 MIR4644-201ENST00000579929 84 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 MAGOH2P-202ENST00000584384 429 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AC020914.6-201ENST00000594327 272 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AL596327.1-201ENST00000603629 213 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 BNIP3P11-201ENST00000603878 563 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AL592436.1-201ENST00000605135 558 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AC080013.4-201ENST00000607624 649 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AC018816.2-201ENST00000621460 353 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 MIR6500-201ENST00000622700 86 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AC103706.2-201ENST00000638080 240 ntBASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
TRBV4-1A0A0J9YWV2 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 RNU1-32P-201ENST00000363937 159 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 RNVU1-3-201ENST00000364313 161 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 MIR585-201ENST00000384887 94 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 RNA5SP424-201ENST00000390988 115 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 U3.29-201ENST00000391296 212 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 HMGB3P20-201ENST00000417997 600 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AL593851.1-201ENST00000426171 157 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AC006548.1-201ENST00000427470 102 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 UBE2D3P1-201ENST00000436669 444 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 ARPC3P5-201ENST00000448802 534 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AC006480.1-201ENST00000449887 378 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 RNU7-136P-201ENST00000458819 69 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 RN7SKP116-201ENST00000516902 319 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AC008011.1-201ENST00000545989 227 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 OR6C73P-201ENST00000546432 358 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AC008015.1-201ENST00000555505 465 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AC120057.2-201ENST00000571520 271 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AL669831.4-202ENST00000590817 238 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AL355812.1-201ENST00000603215 216 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AC104785.1-201ENST00000603220 588 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AC018714.1-201ENST00000605028 208 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 AL607023.1-201ENST00000620045 248 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 CR381572.1-201ENST00000625098 102 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.41□□□□□ -1.86
TRBV4-1A0A0J9YWV2 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
TRBV4-1A0A0J9YWV2 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.4□□□□□ -1.86
TRBV4-1A0A0J9YWV2 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
TRBV4-1A0A0J9YWV2 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
TRBV4-1A0A0J9YWV2 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
TRBV4-1A0A0J9YWV2 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TRBV4-1A0A0J9YWV2 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
TRBV4-1A0A0J9YWV2 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.4□□□□□ -1.87
TRBV4-1A0A0J9YWV2 U1.1-201ENST00000384101 164 ntBASIC3.4□□□□□ -1.87
TRBV4-1A0A0J9YWV2 RNU6-761P-201ENST00000384148 107 ntBASIC3.4□□□□□ -1.87
TRBV4-1A0A0J9YWV2 CYCSP45-201ENST00000402289 315 ntBASIC3.4□□□□□ -1.87
TRBV4-1A0A0J9YWV2 AL022722.2-201ENST00000402519 180 ntBASIC3.4□□□□□ -1.87
TRBV4-1A0A0J9YWV2 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 198.8 ms