Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 SNORA26.7-201ENST00000391288 122 ntBASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 AL590290.1-201ENST00000405336 380 ntBASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 AL138880.1-201ENST00000405824 642 ntBASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 BUD31P2-201ENST00000449374 300 ntBASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 AP000705.1-201ENST00000454567 350 ntBASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 AC011825.1-201ENST00000484967 388 ntBASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 HMGB1P38-201ENST00000490557 577 ntBASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 KLHL2P1-201ENST00000508691 521 ntBASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 MTCO2P32-201ENST00000514865 403 ntBASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 RNU6-1308P-201ENST00000516817 103 ntBASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 AC128657.1-201ENST00000549459 145 ntBASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 AL451007.1-201ENST00000595491 289 ntBASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 AC090525.3-201ENST00000605601 189 ntBASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 AC245389.2-201ENST00000616023 576 ntBASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 AC243756.2-201ENST00000618406 463 ntBASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 AC242843.1-201ENST00000618702 573 ntBASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 AL137790.1-201ENST00000634283 177 ntBASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 MTCO1P24-201ENST00000515438 1558 ntBASIC2.34□□□□□ -2.03
TRAV27A0A087WT01 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 RNU1-100P-201ENST00000365255 165 ntBASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 DEFA7P-201ENST00000382676 285 ntBASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 MIR128-1-201ENST00000384921 82 ntBASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 DNAJC19P6-201ENST00000401853 280 ntBASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 RPLP0P7-201ENST00000416050 667 ntBASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 RPL7P10-201ENST00000417407 739 ntBASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 RPL21P66-201ENST00000426566 466 ntBASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 AC105272.1-201ENST00000438604 198 ntBASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 AL136126.1-201ENST00000473603 402 ntBASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 MTCO3P35-201ENST00000485582 781 ntBASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 RNA5SP367-201ENST00000516557 118 ntBASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 SNORA70.24-201ENST00000517233 118 ntBASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 AC004486.1-201ENST00000546846 233 ntBASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 SETP2-201ENST00000553886 926 ntBASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 AL049874.4-201ENST00000557593 255 ntBASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 BDH2P1-201ENST00000602288 736 ntBASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 MIR4496-201ENST00000635896 61 ntBASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 AL359715.4-201ENST00000606629 1436 ntBASIC2.33□□□□□ -2.04
TRAV27A0A087WT01 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 SNORD62.1-201ENST00000362541 86 ntBASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 MIR9-1-201ENST00000385198 89 ntBASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 AC109780.2-201ENST00000413467 845 ntBASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 AC109583.1-201ENST00000432156 268 ntBASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 AC008280.2-201ENST00000455473 307 ntBASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 AC126182.1-201ENST00000478134 357 ntBASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 RNA5SP282-201ENST00000516355 108 ntBASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 AC138761.3-201ENST00000579993 334 ntBASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 MIR3670-2-201ENST00000582974 65 ntBASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 MIR5092-201ENST00000583139 88 ntBASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 MIR3670-1-201ENST00000584160 65 ntBASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 MIR3670-3-201ENST00000584855 65 ntBASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 FAM60CP-201ENST00000591086 664 ntBASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 AL356575.1-201ENST00000603008 283 ntBASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 AL160237.3-201ENST00000604114 1013 ntBASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 AC007619.2-201ENST00000605743 379 ntBASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 MIR3670-4-201ENST00000612260 65 ntBASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 AP002907.1-201ENST00000606361 1430 ntBASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 SAGE4P-201ENST00000442271 3381 ntBASIC2.32□□□□□ -2.04
TRAV27A0A087WT01 AC092447.7-201ENST00000422212 1621 ntBASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.31□□□□□ -2.04
TRAV27A0A087WT01 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 227.5 ms