Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
RAI2Q9Y5P3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.13□□□□□ -1.75
RAI2Q9Y5P3 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
RAI2Q9Y5P3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 SNORA60-201ENST00000362396 134 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 RNU6-660P-201ENST00000364566 109 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 SNORA73.2-201ENST00000364946 201 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 OR5H15-201ENST00000383696 930 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 RNU6-1279P-201ENST00000383917 103 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 Y_RNA.505-201ENST00000384489 102 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 HSPE1P12-201ENST00000412576 301 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AC009302.1-201ENST00000417147 390 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 OR8F1P-201ENST00000425243 930 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AL356276.2-201ENST00000435919 558 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AL353706.1-201ENST00000436728 494 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 MTND4P6-201ENST00000438297 472 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AL831737.1-201ENST00000441288 271 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 USP9YP10-201ENST00000454868 628 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 ARPC3P2-201ENST00000457786 533 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 RPS4XP15-201ENST00000489210 795 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 USP9YP5-201ENST00000511770 630 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 FTH1P21-201ENST00000512179 511 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AC026412.2-201ENST00000512270 1075 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AC008802.1-201ENST00000519121 791 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AC025627.2-201ENST00000576220 160 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 MIR3611-201ENST00000584484 83 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AC008507.1-201ENST00000587506 734 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AC020914.6-201ENST00000594327 272 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AC068790.6-201ENST00000602558 258 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AL596327.1-201ENST00000603629 213 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AL451044.1-201ENST00000604867 238 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 RNU4-89P-201ENST00000607443 133 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AL391261.4-201ENST00000616012 481 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AC009878.1-201ENST00000621819 340 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AC084035.1-201ENST00000634543 607 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 MARK2P15-201ENST00000432204 2186 ntBASIC4.12□□□□□ -1.75
RAI2Q9Y5P3 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 CR383658.2-201ENST00000547576 1525 ntBASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 RNA5SP124-201ENST00000362739 110 ntBASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 SNRPEP2-201ENST00000397592 279 ntBASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 DSTNP4-201ENST00000399472 474 ntBASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 AL590704.1-201ENST00000402856 794 ntBASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 RNU6-603P-201ENST00000411403 107 ntBASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 AC083875.1-201ENST00000419509 405 ntBASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 AC009237.2-201ENST00000421358 284 ntBASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 MTCO2P34-201ENST00000421994 607 ntBASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 AL049610.1-201ENST00000423374 372 ntBASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 OR5BE1P-201ENST00000425977 939 ntBASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 AC239809.1-201ENST00000450470 217 ntBASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 SNRPGP9-201ENST00000456025 225 ntBASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 MTCYBP17-201ENST00000503579 789 ntBASIC4.11□□□□□ -1.75
RAI2Q9Y5P3 SNX5P1-201ENST00000505757 1041 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms