Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
HRH3Q9Y5N1 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 DDX10P1-201ENST00000448545 1933 ntBASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 Y_RNA.214-201ENST00000364201 112 ntBASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 RNU6-398P-201ENST00000384143 109 ntBASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 Y_RNA.785-201ENST00000384290 109 ntBASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 AL139039.1-201ENST00000401900 692 ntBASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 RNU6-1156P-201ENST00000410365 100 ntBASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 AL590135.1-201ENST00000422215 156 ntBASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 RPS12P5-201ENST00000423449 371 ntBASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 HMGB3P24-201ENST00000433260 622 ntBASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 AL031274.1-201ENST00000450334 232 ntBASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 RPL31P60-201ENST00000478450 367 ntBASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 AC006499.3-201ENST00000506077 748 ntBASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 AC069113.1-201ENST00000517763 267 ntBASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 SETP7-201ENST00000552169 453 ntBASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 MRPS21P8-201ENST00000569196 235 ntBASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 MIR3189-201ENST00000578735 73 ntBASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 AL138895.2-201ENST00000603019 178 ntBASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HRH3Q9Y5N1 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 COX6B1P3-201ENST00000312310 260 ntBASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 RNU6-770P-201ENST00000363929 105 ntBASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 RNU4-50P-201ENST00000364361 141 ntBASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 RNU6-701P-201ENST00000384059 107 ntBASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 U3.29-201ENST00000391296 212 ntBASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 EEF1A1P1-201ENST00000447052 739 ntBASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 PCMTD1P1-201ENST00000455560 355 ntBASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 RPL23AP31-201ENST00000456160 467 ntBASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 AP002453.1-201ENST00000492327 668 ntBASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 AC092436.3-201ENST00000511788 257 ntBASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 RFPL4AP5-201ENST00000514977 504 ntBASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 AC103783.1-201ENST00000520506 373 ntBASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 AC090151.1-201ENST00000520784 730 ntBASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 RN7SL753P-201ENST00000581238 290 ntBASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.73□□□□□ -1.49
HRH3Q9Y5N1 AL512652.1-201ENST00000619006 500 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms