Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
PCDHA3Q9Y5H8 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 ZNF33CP-201ENST00000432492 2030 ntBASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 AL592437.2-201ENST00000421655 2434 ntBASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 LINC01109-201ENST00000603837 3081 ntBASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 RPS20P2-201ENST00000402520 389 ntBASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 AC004690.1-201ENST00000418216 328 ntBASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 HLA-N-201ENST00000437516 135 ntBASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 RABEPKP1-201ENST00000440529 1026 ntBASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 AC073587.1-201ENST00000447093 876 ntBASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 ABCF2P2-201ENST00000450549 296 ntBASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 AC098824.1-201ENST00000453565 980 ntBASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 AL358832.1-201ENST00000497800 389 ntBASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 AC006499.6-201ENST00000511169 607 ntBASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 IGKV1-32-201ENST00000519290 311 ntBASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 AP000827.1-201ENST00000527814 258 ntBASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 PHBP17-201ENST00000528576 541 ntBASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 AC136619.2-201ENST00000563361 631 ntBASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 RPL26P30-202ENST00000602923 645 ntBASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 AL022154.1-201ENST00000604698 785 ntBASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 AC026368.1-201ENST00000614934 690 ntBASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 AC006065.6-201ENST00000625201 545 ntBASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHA3Q9Y5H8 PABPC1P7-201ENST00000413177 1513 ntBASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 RNVU1-3-201ENST00000364313 161 ntBASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 MIR298-201ENST00000401212 88 ntBASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 NANOGP6-201ENST00000429190 847 ntBASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 MTND3P21-201ENST00000433774 331 ntBASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 RPS27AP17-201ENST00000463344 455 ntBASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 AC083982.1-201ENST00000485679 344 ntBASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 OR7H2P-201ENST00000513483 306 ntBASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 RNU6-714P-201ENST00000516963 103 ntBASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 RNU6-201P-201ENST00000517100 61 ntBASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 RN7SKP234-201ENST00000517173 224 ntBASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 BRD9P1-201ENST00000529855 560 ntBASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 CYP4A43P-201ENST00000568156 121 ntBASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 MIR3682-201ENST00000581338 84 ntBASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 AL355812.1-201ENST00000603215 216 ntBASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 U6atac.1-201ENST00000616025 117 ntBASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 AC019278.1-201ENST00000623516 479 ntBASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 AL049536.1-201ENST00000625043 744 ntBASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHA3Q9Y5H8 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AL139811.1-201ENST00000424779 2299 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms