Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC130360.1-201ENST00000425489 1117 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 AC073410.1-201ENST00000435125 589 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 AC099799.1-201ENST00000439809 192 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 RPL23AP33-201ENST00000442301 452 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 AC002553.3-201ENST00000453002 341 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 Z83838.1-202ENST00000456225 839 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 AC010631.1-201ENST00000474150 156 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 AP002453.1-201ENST00000492327 668 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 AC104564.1-201ENST00000493028 407 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 AC104136.1-201ENST00000512969 394 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 RN7SKP82-201ENST00000516786 223 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 AC130365.2-201ENST00000525882 1201 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 AP000827.1-201ENST00000527814 258 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 AC027544.3-201ENST00000535082 757 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 AL049779.3-201ENST00000557141 606 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 AC119403.2-201ENST00000590960 598 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 AC067931.1-201ENST00000624190 671 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 AL137141.1-201ENST00000624622 4836 ntBASIC5.85□□□□□ -1.47
PCDHGA11Q9Y5H2 AC104118.1-201ENST00000607625 1589 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 SNORA21-201ENST00000362423 132 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 Y_RNA.39-201ENST00000362620 98 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 RNU4-70P-201ENST00000384579 139 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 RNU6-821P-201ENST00000390995 107 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 CYB5AP4-201ENST00000396692 399 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 MIR1250-201ENST00000408098 113 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 SNORA77.2-201ENST00000408571 112 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 RNU2-23P-201ENST00000410545 195 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 MYL6P5-201ENST00000412707 459 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 AL096829.1-201ENST00000413677 457 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 OR6E1P-201ENST00000414424 923 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 RPS24P13-201ENST00000442520 397 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 AC245028.2-201ENST00000458673 253 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 AC117503.1-201ENST00000472241 394 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 AC026979.1-201ENST00000492525 396 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 RPL7P23-201ENST00000493874 747 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 RN7SL362P-201ENST00000494228 267 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 RNY3P15-201ENST00000516297 97 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 SCARNA16.2-201ENST00000516520 172 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 RN7SKP277-201ENST00000516895 283 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 RNU6-388P-201ENST00000517012 105 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 RNU6-389P-201ENST00000517048 105 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 IGKV2D-36-201ENST00000518643 226 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 MIR5010-201ENST00000582846 120 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 AC011494.1-201ENST00000596454 237 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 AC025857.2-201ENST00000602711 238 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 RNA5SP439-201ENST00000617595 124 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 AL121839.2-201ENST00000565058 6943 ntBASIC5.84□□□□□ -1.47
PCDHGA11Q9Y5H2 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.84□□□□□ -1.48
PCDHGA11Q9Y5H2 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
PCDHGA11Q9Y5H2 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PCDHGA11Q9Y5H2 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 SNORA41-201ENST00000384675 132 ntBASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 RN7SKP17-201ENST00000411242 351 ntBASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 RPS23P10-201ENST00000416185 486 ntBASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHGA11Q9Y5H2 EIF4EP1-201ENST00000422311 642 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms