Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 AL450345.1-202ENST00000605741 3881 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 AC112198.2-201ENST00000426589 6996 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 AC099654.2-201ENST00000433031 1980 ntBASIC4.64□□□□□ -1.67
PCDHGA9Q9Y5G4 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 RNU6-263P-201ENST00000363811 107 ntBASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 AL359643.1-201ENST00000404109 423 ntBASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 RNU2-47P-201ENST00000410649 186 ntBASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 DPPA2P1-201ENST00000428060 556 ntBASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 USP9YP15-201ENST00000442391 422 ntBASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 BTF3P6-201ENST00000448054 499 ntBASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 SLC25A18P1-201ENST00000449385 454 ntBASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 MTCO3P20-201ENST00000454926 688 ntBASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 AC012170.1-201ENST00000495139 359 ntBASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 AC017037.2-201ENST00000513850 890 ntBASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 ENPP7P9-201ENST00000514456 627 ntBASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 MIR3118-1-201ENST00000581787 76 ntBASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 SNORD84-203ENST00000584275 78 ntBASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 AC091953.2-201ENST00000623979 160 ntBASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 AL138713.1-201ENST00000624026 2130 ntBASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.63□□□□□ -1.67
PCDHGA9Q9Y5G4 AC074029.4-201ENST00000624796 1859 ntBASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 AL022322.2-201ENST00000624072 20397 ntBASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 OR4G2P-201ENST00000328113 903 ntBASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 RNU6-223P-201ENST00000362830 107 ntBASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 RNU5A-8P-201ENST00000364102 114 ntBASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 RPS3AP36-201ENST00000398190 775 ntBASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 MIR1271-201ENST00000408537 86 ntBASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 RPS7P15-201ENST00000415804 584 ntBASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 BX510359.2-201ENST00000417920 305 ntBASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 AC099677.1-201ENST00000420575 175 ntBASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 AC009480.2-201ENST00000422916 432 ntBASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 AC133104.1-201ENST00000429100 218 ntBASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 RAC1P7-201ENST00000445367 377 ntBASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 RPS17P13-201ENST00000448974 407 ntBASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 RNU7-59P-201ENST00000459101 61 ntBASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 SNORD108-201ENST00000459332 71 ntBASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 AC010587.1-201ENST00000505809 469 ntBASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 MRPS33P2-201ENST00000507850 322 ntBASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 RNU6-1095P-201ENST00000516148 108 ntBASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 RNU6-314P-201ENST00000516574 104 ntBASIC4.62□□□□□ -1.67
PCDHGA9Q9Y5G4 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms