Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AL121895.2-201ENST00000619558 447 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AC006963.1-201ENST00000624003 1052 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 OR8B1P-202ENST00000641132 1178 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AC119674.1-207ENST00000641355 633 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 OR6C71P-202ENST00000641886 1107 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 GABPAP-201ENST00000419271 1356 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 ZNF285B-201ENST00000561698 1767 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AC007656.2-201ENST00000624902 4547 ntBASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ATG4BQ9Y4P1 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 RNA5SP51-201ENST00000364750 119 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 RNU6-657P-201ENST00000383904 107 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 RNU6-1181P-201ENST00000384191 106 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 RPL21P17-201ENST00000397467 475 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 AIMP1P1-201ENST00000418670 937 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 NANOGP5-201ENST00000424456 877 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 GOT2P5-201ENST00000433995 546 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 USP9YP22-201ENST00000438971 294 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 AC010655.1-201ENST00000449336 292 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 RPL21P104-201ENST00000464143 478 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 AC091564.1-201ENST00000464563 479 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 AC013828.1-201ENST00000481845 158 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 GTF2IP9-201ENST00000502460 301 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 AC113347.3-201ENST00000509113 148 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 NDUFB4P9-201ENST00000511646 388 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 RNU6-415P-201ENST00000516252 97 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 RNU1-95P-201ENST00000516357 160 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 RNU1-128P-201ENST00000516704 160 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 MIR3690-201ENST00000580266 75 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 AC015688.2-201ENST00000584523 262 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 AL035411.2-201ENST00000604022 421 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 AC090425.2-201ENST00000608818 501 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 AL732618.1-201ENST00000623251 301 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 AC090772.4-201ENST00000623599 362 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 MTND2P41-201ENST00000637599 773 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 MKKS-204ENST00000639674 192 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 AL732372.2-225ENST00000642124 456 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 NUP58P1-201ENST00000502546 1738 ntBASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
ATG4BQ9Y4P1 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 SNORA5A-201ENST00000384111 134 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 MIR200C-201ENST00000384980 68 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 SNORA40.2-201ENST00000390847 128 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 AL391417.1-201ENST00000404100 426 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 RNU2-42P-201ENST00000410697 113 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 RNU4-22P-201ENST00000411058 166 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 RPS3AP37-201ENST00000419176 745 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 AC007435.1-201ENST00000421086 415 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 HSFY1P1-201ENST00000423928 1178 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 AC092648.1-201ENST00000425870 423 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 AL035410.1-201ENST00000427409 427 ntBASIC3.43□□□□□ -1.86
ATG4BQ9Y4P1 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms