Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 U3.4-201ENST00000363352 213 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 RNA5SP167-201ENST00000365461 116 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 USP9YP33-201ENST00000412220 421 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 RPS27AP7-201ENST00000422792 455 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 NIPA2P1-201ENST00000426223 976 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 RPS29P17-201ENST00000430795 166 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 ATP5HP2-201ENST00000433885 485 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 USP9YP35-201ENST00000435696 412 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 ZNF114P1-201ENST00000453500 292 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 RNA5SP246-201ENST00000458909 119 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 DSTNP2-201ENST00000504533 515 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 MTND4P2-201ENST00000507767 1203 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 CBX3P3-201ENST00000508108 532 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AC026726.1-201ENST00000512859 601 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 RN7SKP96-201ENST00000516948 297 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AP002963.1-201ENST00000530590 184 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 GTF2IP22-201ENST00000554443 182 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AC022968.1-201ENST00000567372 442 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AGGF1P4-201ENST00000568249 801 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AC012435.1-202ENST00000568772 240 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AC244505.7-201ENST00000599675 272 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AL596327.1-201ENST00000603629 213 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 MTCYBP22-201ENST00000603788 447 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AL356218.2-201ENST00000605264 187 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AL031775.1-201ENST00000607014 887 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AC008121.2-201ENST00000614647 523 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AC009878.1-201ENST00000621819 340 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AC090582.1-201ENST00000636321 199 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 ZNF37BP-203ENST00000452306 1352 ntBASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
MRPS28Q9Y2Q9 AC027287.1-201ENST00000553115 1453 ntBASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 RPL21P132-201ENST00000331267 462 ntBASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 Y_RNA.18-201ENST00000362461 102 ntBASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 RNU1-32P-201ENST00000363937 159 ntBASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 RNU6-253P-201ENST00000384730 105 ntBASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 AC007066.1-201ENST00000392902 381 ntBASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 FABP12P1-201ENST00000401911 322 ntBASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 RNU2-21P-201ENST00000410368 188 ntBASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 Y_RNA.599-201ENST00000410489 109 ntBASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 RNU4-25P-201ENST00000410569 230 ntBASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 ELOCP19-201ENST00000411919 318 ntBASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 AL031779.1-201ENST00000415663 330 ntBASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 COX6B1P7-201ENST00000430845 235 ntBASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 AL358472.1-201ENST00000431295 329 ntBASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 KCTD10P1-201ENST00000434203 625 ntBASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.47□□□□□ -1.85
MRPS28Q9Y2Q9 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms