Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC104164.1-201ENST00000460282 590 ntBASIC7.82□□□□□ -1.16
TRIM35Q9UPQ4 RPL23AP55-201ENST00000498163 452 ntBASIC7.82□□□□□ -1.16
TRIM35Q9UPQ4 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TRIM35Q9UPQ4 RNU5F-8P-201ENST00000515941 111 ntBASIC7.82□□□□□ -1.16
TRIM35Q9UPQ4 SCARNA18.1-201ENST00000516330 83 ntBASIC7.82□□□□□ -1.16
TRIM35Q9UPQ4 CYCSP22-201ENST00000517555 339 ntBASIC7.82□□□□□ -1.16
TRIM35Q9UPQ4 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC7.82□□□□□ -1.16
TRIM35Q9UPQ4 AC063949.1-201ENST00000552900 865 ntBASIC7.82□□□□□ -1.16
TRIM35Q9UPQ4 AL138895.2-201ENST00000603019 178 ntBASIC7.82□□□□□ -1.16
TRIM35Q9UPQ4 ELOCP5-201ENST00000604924 333 ntBASIC7.82□□□□□ -1.16
TRIM35Q9UPQ4 RPL12P48-201ENST00000605620 304 ntBASIC7.82□□□□□ -1.16
TRIM35Q9UPQ4 OR52B5P-204ENST00000641744 3467 ntBASIC7.82□□□□□ -1.16
TRIM35Q9UPQ4 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TRIM35Q9UPQ4 RLIMP1-201ENST00000339626 1680 ntBASIC7.82□□□□□ -1.16
TRIM35Q9UPQ4 EEF1A1P36-201ENST00000427807 1351 ntBASIC7.82□□□□□ -1.16
TRIM35Q9UPQ4 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
TRIM35Q9UPQ4 AL021877.2-201ENST00000624442 10684 ntBASIC7.82□□□□□ -1.16
TRIM35Q9UPQ4 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TRIM35Q9UPQ4 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 RNA5SP211-201ENST00000365516 117 ntBASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 Y_RNA.400-201ENST00000383963 111 ntBASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 MIR1282-201ENST00000408865 101 ntBASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 RPS26P40-201ENST00000435209 294 ntBASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 AP001324.2-201ENST00000461163 319 ntBASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 TRAPPC2P7-201ENST00000509650 231 ntBASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 AC114781.3-201ENST00000512083 142 ntBASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 RNU6-1092P-201ENST00000516955 87 ntBASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 AP003396.4-201ENST00000527574 265 ntBASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 MIR6778-201ENST00000617912 73 ntBASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 AC092747.4-201ENST00000620519 1861 ntBASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM35Q9UPQ4 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 AC241584.2-201ENST00000637142 2090 ntBASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 WBP11P1-201ENST00000562560 1931 ntBASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 RNU6-715P-201ENST00000365204 103 ntBASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 DBIP1-201ENST00000401435 260 ntBASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 MIR1203-201ENST00000408812 85 ntBASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 AC007098.1-201ENST00000420122 367 ntBASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 RPS12P5-201ENST00000423449 371 ntBASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 AC245884.2-201ENST00000426257 404 ntBASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 RPS10P18-201ENST00000442662 495 ntBASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 ACA64.4-201ENST00000459070 127 ntBASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 RPL7AP10-201ENST00000481016 791 ntBASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 CYCTP-201ENST00000504253 315 ntBASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 IGLV3-30-201ENST00000524362 298 ntBASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 AC022884.3-201ENST00000579571 248 ntBASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 MIR4776-2-201ENST00000580204 80 ntBASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 AL161616.1-201ENST00000611867 286 ntBASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 OSBPL9P4-201ENST00000371707 1800 ntBASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM35Q9UPQ4 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
TRIM35Q9UPQ4 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 159.1 ms