Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 NELL2-211ENST00000548826 559 ntTSL 2 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 ARL2BPP2-201ENST00000550907 489 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 MTCO1P40-201ENST00000574371 625 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AL360085.1-201ENST00000604713 532 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AL359535.1-201ENST00000612100 1087 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AC084757.4-201ENST00000616350 526 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 uc_338.13-201ENST00000618243 179 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AC007342.8-201ENST00000623278 678 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AC079228.1-201ENST00000624774 1049 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 AC000374.1-201ENST00000434698 1745 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 ZNF962P-201ENST00000443465 3140 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 ZNF285B-201ENST00000561698 1767 ntBASIC3.27□□□□□ -1.89
NOTCH3Q9UM47 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 Y_RNA.111-201ENST00000363248 100 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 RNU6-534P-201ENST00000364877 106 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 SNORA75.4-201ENST00000391278 119 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 DNAJC19P6-201ENST00000401853 280 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AL592291.1-201ENST00000403830 352 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 RPS15AP38-201ENST00000413110 372 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC004987.3-201ENST00000413879 771 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 GPM6BP2-201ENST00000432046 144 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 MTCYBP6-201ENST00000441810 138 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 GPM6BP1-201ENST00000446387 144 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AL627224.1-201ENST00000448334 444 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AL591473.1-201ENST00000464297 313 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 UBTFL6-201ENST00000477929 1024 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 LARP1BP2-201ENST00000486594 519 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC146944.2-203ENST00000502493 354 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC139495.1-202ENST00000513164 354 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC022483.1-201ENST00000514020 567 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 PDCD5P1-201ENST00000543528 309 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 RPL21P12-201ENST00000559810 515 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC079587.1-201ENST00000603846 277 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AL354984.3-201ENST00000604803 325 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC025594.3-201ENST00000613068 790 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 MIR3662-201ENST00000637030 95 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 MAPK10-349ENST00000641767 3661 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 RNU6-845P-201ENST00000362578 103 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 Y_RNA.89-201ENST00000363031 102 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 RNU1-132P-201ENST00000364300 164 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 Y_RNA.296-201ENST00000364930 108 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 Y_RNA.394-201ENST00000383942 103 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 RNU6-907P-201ENST00000390924 102 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC093719.1-202ENST00000392735 373 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 ELOCP14-201ENST00000428070 331 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 AC236972.1-201ENST00000433225 199 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 MTCYBP45-201ENST00000435243 565 ntBASIC3.26□□□□□ -1.89
NOTCH3Q9UM47 ELOCP7-201ENST00000439968 331 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms