Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 MIR1289-1-201ENST00000408836 144 ntBASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 RPL36P19-201ENST00000430744 301 ntBASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 AL353705.1-201ENST00000433468 480 ntBASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 UBE2V1P5-201ENST00000440070 405 ntBASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 AC087879.1-201ENST00000474343 374 ntBASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 AC008565.1-201ENST00000509046 885 ntBASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 RNA5SP217-201ENST00000515959 91 ntBASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 AC245166.1-201ENST00000521012 253 ntBASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 AC012182.1-201ENST00000570133 895 ntBASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 AC138932.5-201ENST00000617759 563 ntBASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 AC024341.1-201ENST00000526444 1552 ntBASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.8□□□□□ -1.8
CTNNA3Q9UI47 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 AL365361.1-201ENST00000566942 3481 ntBASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 RPL23AP57-201ENST00000332361 466 ntBASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 U3.11-201ENST00000364476 212 ntBASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 SNORD115-48-201ENST00000364764 76 ntBASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 RNU6-837P-201ENST00000391056 108 ntBASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 RPL32P35-201ENST00000415214 394 ntBASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 COTL1P1-201ENST00000422309 375 ntBASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 RPL23AP69-201ENST00000431134 458 ntBASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 HIGD1AP11-201ENST00000438361 280 ntBASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 XKRY2-201ENST00000442362 1093 ntBASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 HMGB1P15-201ENST00000453854 435 ntBASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 AC008280.2-201ENST00000455473 307 ntBASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 AP001992.1-205ENST00000462248 379 ntBASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 RPL27AP5-201ENST00000469428 449 ntBASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 SCARNA20.6-201ENST00000517251 106 ntBASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 IGHV3-76-201ENST00000522465 295 ntBASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 CIR1P1-201ENST00000524055 1133 ntBASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 AC016877.3-201ENST00000606778 504 ntBASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 STMN1P1-201ENST00000617809 440 ntBASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 AC024595.1-201ENST00000623088 387 ntBASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 AC017104.5-201ENST00000637647 639 ntBASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CTNNA3Q9UI47 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 AL359893.1-201ENST00000447628 1580 ntBASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 RNU6-374P-201ENST00000364146 108 ntBASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 AC092745.2-202ENST00000411880 369 ntBASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 AC006960.1-201ENST00000419980 153 ntBASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 OR2B8P-201ENST00000432841 938 ntBASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 AC091862.1-201ENST00000438016 1100 ntBASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 RPS26P56-201ENST00000444468 240 ntBASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 AL035407.2-201ENST00000454090 378 ntBASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 S100A11P2-201ENST00000467589 312 ntBASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 ST13P14-201ENST00000474095 734 ntBASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 AC118282.1-201ENST00000506408 765 ntBASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 AC119751.1-201ENST00000513357 765 ntBASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 IGKV2D-36-201ENST00000518643 226 ntBASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 AP005205.1-201ENST00000563503 508 ntBASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 AC008687.2-201ENST00000597865 520 ntBASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 AL109653.1-201ENST00000603091 248 ntBASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 AL365400.2-201ENST00000605604 902 ntBASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 AL162274.2-201ENST00000614406 332 ntBASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 AC090617.9-201ENST00000623751 147 ntBASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 AC006963.1-201ENST00000624003 1052 ntBASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 AC083865.1-201ENST00000636634 831 ntBASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CTNNA3Q9UI47 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms