Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 SNORD88.1-201ENST00000408684 91 ntBASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 DUTP6-201ENST00000425573 462 ntBASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 RPS20P5-201ENST00000434808 360 ntBASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 NPM1P13-201ENST00000452663 865 ntBASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 RPS24P6-201ENST00000452670 400 ntBASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 AP001992.1-205ENST00000462248 379 ntBASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 AC126121.1-201ENST00000482313 553 ntBASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 AC239860.2-201ENST00000525886 270 ntBASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 AC007536.1-201ENST00000533382 349 ntBASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 AC010653.1-201ENST00000571108 881 ntBASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 AC125494.3-201ENST00000602759 455 ntBASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 AC068831.7-201ENST00000616954 363 ntBASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 AC103988.1-201ENST00000566382 2177 ntBASIC2.73□□□□□ -1.97
VPS29Q9UBQ0 AC092593.1-201ENST00000515413 1815 ntBASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 MIR421-201ENST00000365696 85 ntBASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 MIR181B1-201ENST00000385240 110 ntBASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 Z85994.2-201ENST00000434327 452 ntBASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 RPS7P2-201ENST00000435134 607 ntBASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 AC104978.1-201ENST00000449387 391 ntBASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 RPL36AP33-201ENST00000450395 310 ntBASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 NIPA2P5-201ENST00000452282 464 ntBASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 HMGB1P15-201ENST00000453854 435 ntBASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 AC010285.1-201ENST00000470580 392 ntBASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 SCARNA13-201ENST00000516672 275 ntBASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 RNA5SP468-201ENST00000516782 93 ntBASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 AP000857.1-201ENST00000532151 543 ntBASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 AC078899.3-201ENST00000599065 212 ntBASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 MIR92B-201ENST00000607575 96 ntBASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 MIR8057-201ENST00000620957 69 ntBASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 AC006963.1-201ENST00000624003 1052 ntBASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 AC020923.1-201ENST00000624021 917 ntBASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 AC004777.1-201ENST00000624317 287 ntBASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 SAGE4P-201ENST00000442271 3381 ntBASIC2.72□□□□□ -1.97
VPS29Q9UBQ0 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 PRRC2CP1-201ENST00000404428 159 ntBASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 AL024507.1-201ENST00000412741 274 ntBASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 AL671855.1-201ENST00000446875 1203 ntBASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 AL035407.2-201ENST00000454090 378 ntBASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 snoU13.24-201ENST00000458998 104 ntBASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 HMGB1P25-201ENST00000468402 607 ntBASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 RPL23AP11-201ENST00000475260 469 ntBASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 RPL7L1P13-201ENST00000511702 739 ntBASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 SNORA9.3-201ENST00000516383 129 ntBASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 RN7SKP96-201ENST00000516948 297 ntBASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 RN7SKP283-201ENST00000517197 270 ntBASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 AL121603.1-201ENST00000553815 142 ntBASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 AL157394.1-201ENST00000562983 1224 ntBASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 MIR3605-201ENST00000583214 100 ntBASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 SNORD84-203ENST00000584275 78 ntBASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 BDH2P1-201ENST00000602288 736 ntBASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 NTAN1P1-201ENST00000603150 646 ntBASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 MIR3651-201ENST00000630427 90 ntBASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
VPS29Q9UBQ0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms