Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 AC114546.3-201ENST00000623582 1734 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 RNU6-178P-201ENST00000384631 104 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 MIR937-201ENST00000401271 86 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 MIR1271-201ENST00000408537 86 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 RNU2-9P-201ENST00000410194 145 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 RNU2-15P-201ENST00000410692 191 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 AC007738.1-201ENST00000413892 348 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 AF186996.5-201ENST00000418098 904 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 AL513185.2-201ENST00000425543 193 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 AL606489.2-201ENST00000433886 234 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 RPL35AP21-201ENST00000437667 333 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 SEPT14P3-201ENST00000439401 183 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 CALM1P1-201ENST00000442082 433 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 AL732372.2-207ENST00000445840 183 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 SLC25A18P1-201ENST00000449385 454 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 SNRPGP6-201ENST00000451124 220 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 AC010733.1-201ENST00000451515 401 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 SEPT14P2-201ENST00000453405 183 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 AC083798.1-201ENST00000472671 131 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 RPL5P22-201ENST00000480199 884 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 AC021382.1-201ENST00000483523 359 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 MTCO2P30-201ENST00000503662 364 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 MTND3P22-201ENST00000510932 243 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 SEPT14P4-201ENST00000513445 186 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 RNA5SP337-201ENST00000517007 109 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 FO082796.1-201ENST00000523795 183 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 GLYCAM1-201ENST00000546596 285 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 MIR3146-201ENST00000580367 79 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 AL356585.4-201ENST00000623078 1229 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 AC091905.4-201ENST00000623432 202 ntBASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
KCMF1Q9P0J7 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 BTBD10P1-201ENST00000549824 1352 ntBASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 AC104623.2-202ENST00000623477 4002 ntBASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 RNU6-1120P-201ENST00000362988 108 ntBASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 RNVU1-3-201ENST00000364313 161 ntBASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 Y_RNA.279-201ENST00000364763 95 ntBASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 AL109941.1-201ENST00000401925 229 ntBASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 Z97832.1-201ENST00000402490 328 ntBASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 OR9R1P-201ENST00000412200 877 ntBASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 AC004987.3-201ENST00000413879 771 ntBASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 AL807761.1-201ENST00000417622 171 ntBASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 AC104333.2-201ENST00000422630 192 ntBASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 GPR143P-201ENST00000434155 205 ntBASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 RPS15AP9-201ENST00000439856 381 ntBASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 AC093019.1-201ENST00000443135 252 ntBASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 RPS20P21-201ENST00000466859 343 ntBASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 RN7SL319P-201ENST00000480656 221 ntBASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 OR5H5P-201ENST00000503164 928 ntBASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 RNA5SP392-201ENST00000516905 112 ntBASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 IGLVIV-53-201ENST00000520107 367 ntBASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 AL109766.1-201ENST00000555080 552 ntBASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.69□□□□□ -1.66
KCMF1Q9P0J7 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms