Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCM2LQ9NUG4 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 NEAT1-202ENST00000501122 22743 ntBASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 Y_RNA.9-201ENST00000362354 101 ntBASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 RNU4-12P-201ENST00000365233 139 ntBASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 RNU6-1103P-201ENST00000384150 107 ntBASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 Y_RNA.554-201ENST00000384672 102 ntBASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 SNORD96B-201ENST00000386148 79 ntBASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 RGS17P1-201ENST00000423358 553 ntBASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 EI24P4-201ENST00000423683 1078 ntBASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 AC019097.1-201ENST00000424783 735 ntBASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 AC023598.1-201ENST00000472521 361 ntBASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 MTAPP1-201ENST00000489154 819 ntBASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 PTGES3P3-201ENST00000511479 482 ntBASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 RAB9BP1-201ENST00000519581 626 ntBASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 RPL10P14-201ENST00000565265 298 ntBASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 MIR3146-201ENST00000580367 79 ntBASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 MIR3118-1-201ENST00000581787 76 ntBASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 AL159972.1-201ENST00000625150 448 ntBASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 AC009643.2-201ENST00000603543 1448 ntBASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCM2LQ9NUG4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 RNA5SP123-201ENST00000363244 119 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 RNU6-263P-201ENST00000363811 107 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 RNU5A-8P-201ENST00000364102 114 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 RNU6-837P-201ENST00000391056 108 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 AL080315.1-201ENST00000406055 466 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 U3.35-201ENST00000408405 208 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 AC093655.2-201ENST00000425735 631 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 MRPS18BP2-201ENST00000434310 759 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 AC002486.1-201ENST00000435098 391 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 RPS29P9-201ENST00000440360 171 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 Z99127.3-201ENST00000448158 395 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 AC013267.1-201ENST00000458227 267 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 snoU13.3-201ENST00000459441 104 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 HMGB1P25-201ENST00000468402 607 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 MTCO3P38-201ENST00000468910 766 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 AC007182.2-201ENST00000489251 402 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 RNU6-528P-201ENST00000516926 100 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 AC107934.1-201ENST00000522215 217 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 RPL21P7-201ENST00000557463 483 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 AC234778.2-201ENST00000566241 354 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 AC092325.1-201ENST00000566449 554 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 AC009704.2-201ENST00000618739 483 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 AL356321.1-201ENST00000621360 228 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 AC140113.4-201ENST00000622087 222 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 AC005086.4-201ENST00000623065 213 ntBASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CCM2LQ9NUG4 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms