Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AC119674.1-207ENST00000641355 633 ntBASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
VCX3AQ9NNX9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 RNU6-821P-201ENST00000390995 107 ntBASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 RNU6-712P-201ENST00000410558 100 ntBASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 AL139128.1-201ENST00000413921 941 ntBASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 BX510359.3-201ENST00000422168 306 ntBASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 AL590762.4-201ENST00000425885 253 ntBASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 AL772161.1-201ENST00000439130 476 ntBASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 AC127537.2-201ENST00000439258 465 ntBASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 AL645638.1-201ENST00000440519 361 ntBASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 TPT1P3-201ENST00000492841 512 ntBASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 MTND3P24-201ENST00000506306 329 ntBASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 AC093853.1-201ENST00000515689 483 ntBASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 RNU6-416P-201ENST00000516265 103 ntBASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 AC025881.1-201ENST00000518851 512 ntBASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 IGJP1-201ENST00000522682 475 ntBASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 OR8K4P-201ENST00000534608 872 ntBASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 AC090695.1-201ENST00000561269 1222 ntBASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 OR7E18P-201ENST00000592589 702 ntBASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 AC020914.6-201ENST00000594327 272 ntBASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 DUXAP3-201ENST00000603616 594 ntBASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 uc_338.25-201ENST00000613756 156 ntBASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 AL162574.2-201ENST00000614618 657 ntBASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 AC068722.2-201ENST00000618734 544 ntBASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
VCX3AQ9NNX9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
VCX3AQ9NNX9 AC111188.2-201ENST00000529697 1387 ntBASIC2.84□□□□□ -1.96
VCX3AQ9NNX9 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.84□□□□□ -1.96
VCX3AQ9NNX9 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
VCX3AQ9NNX9 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 SGO1P2-201ENST00000429458 1589 ntBASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 AC244517.1-201ENST00000606030 2086 ntBASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 SNORA25.6-201ENST00000364121 118 ntBASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 SNORA14A-201ENST00000364773 135 ntBASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 U3.42-201ENST00000408746 214 ntBASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 RNA5SP38-201ENST00000410750 119 ntBASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 AL009174.1-201ENST00000426577 416 ntBASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 PTP4A1P3-201ENST00000433661 420 ntBASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 AL691517.1-201ENST00000440833 1235 ntBASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 AC010460.1-201ENST00000507087 466 ntBASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 SNORA31.8-201ENST00000516327 108 ntBASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 ERHP1-201ENST00000523006 310 ntBASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 SNRPGP16-201ENST00000533275 226 ntBASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 AC074051.3-201ENST00000570238 358 ntBASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 AL355812.1-201ENST00000603215 216 ntBASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 AC079880.2-201ENST00000603790 1213 ntBASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 AL451086.1-201ENST00000605596 223 ntBASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 AP004247.3-201ENST00000608682 624 ntBASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 AC112503.2-201ENST00000609005 552 ntBASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 AC006329.2-201ENST00000611491 394 ntBASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 AC010297.1-201ENST00000623948 149 ntBASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
VCX3AQ9NNX9 SNORA51.1-201ENST00000363243 140 ntBASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 MIR525-201ENST00000384978 85 ntBASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 AC110754.1-201ENST00000399740 601 ntBASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 USP9YP36-201ENST00000424581 829 ntBASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 SNRPEP4-201ENST00000435815 279 ntBASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 RPL12P11-201ENST00000439970 501 ntBASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 AL929288.2-201ENST00000446368 407 ntBASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 AC005002.1-201ENST00000447458 540 ntBASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 AC004022.1-201ENST00000447766 1066 ntBASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 HMGN3P1-201ENST00000453847 193 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms