Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.12□□□□□ -1.75
UPF2Q9HAU5 AC119674.1-207ENST00000641355 633 ntBASIC4.12□□□□□ -1.75
UPF2Q9HAU5 SRP72P2-201ENST00000344851 1979 ntBASIC4.12□□□□□ -1.75
UPF2Q9HAU5 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UPF2Q9HAU5 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.12□□□□□ -1.75
UPF2Q9HAU5 ELL2P4-201ENST00000446870 1376 ntBASIC4.12□□□□□ -1.75
UPF2Q9HAU5 AL139811.1-201ENST00000424779 2299 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.11□□□□□ -1.75
UPF2Q9HAU5 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
UPF2Q9HAU5 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
UPF2Q9HAU5 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
UPF2Q9HAU5 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.11□□□□□ -1.75
UPF2Q9HAU5 RNY3P9-201ENST00000384727 106 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 SFR1P1-201ENST00000403720 688 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 PPIAP31-201ENST00000405422 495 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.11□□□□□ -1.75
UPF2Q9HAU5 DBIP2-201ENST00000419076 262 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.11□□□□□ -1.75
UPF2Q9HAU5 TXNL1P1-201ENST00000429528 554 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 AC002542.1-201ENST00000440683 193 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.11□□□□□ -1.75
UPF2Q9HAU5 ART2BP-201ENST00000453501 499 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.11□□□□□ -1.75
UPF2Q9HAU5 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.11□□□□□ -1.75
UPF2Q9HAU5 MTND2P14-201ENST00000482139 351 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 UBE2CP3-201ENST00000502715 450 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 MTATP6P22-201ENST00000507369 598 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 AC104108.1-201ENST00000509930 412 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.11□□□□□ -1.75
UPF2Q9HAU5 SNORA70.18-201ENST00000516696 98 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.11□□□□□ -1.75
UPF2Q9HAU5 HMGB1P1-201ENST00000522557 636 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.11□□□□□ -1.75
UPF2Q9HAU5 OSBPL9P5-201ENST00000542581 171 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 OR8R1P-201ENST00000543943 764 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 AADACP1-206ENST00000561502 1193 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 AC007224.1-201ENST00000564410 144 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 AC090751.1-201ENST00000566966 267 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 AC015917.1-201ENST00000579654 510 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 AC010591.1-201ENST00000603941 649 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.11□□□□□ -1.75
UPF2Q9HAU5 AC012531.5-201ENST00000611375 151 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.11□□□□□ -1.75
UPF2Q9HAU5 AL731566.2-201ENST00000618971 317 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 AC091304.6-201ENST00000619761 202 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.11□□□□□ -1.75
UPF2Q9HAU5 AP002782.1-201ENST00000623107 614 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 AC079416.3-201ENST00000624479 549 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 AC022031.1-201ENST00000585985 2593 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
UPF2Q9HAU5 AP005901.5-201ENST00000545779 1796 ntBASIC4.11□□□□□ -1.75
UPF2Q9HAU5 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
UPF2Q9HAU5 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
UPF2Q9HAU5 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.11□□□□□ -1.75
UPF2Q9HAU5 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.11□□□□□ -1.75
UPF2Q9HAU5 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
UPF2Q9HAU5 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.1□□□□□ -1.75
UPF2Q9HAU5 RNA5SP51-201ENST00000364750 119 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 Y_RNA.408-201ENST00000383987 102 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 SNORD116-8-201ENST00000384365 95 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.1□□□□□ -1.75
UPF2Q9HAU5 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.1□□□□□ -1.75
UPF2Q9HAU5 AL583834.1-201ENST00000406943 343 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.1□□□□□ -1.75
UPF2Q9HAU5 AC004022.2-201ENST00000413824 193 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
UPF2Q9HAU5 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.1□□□□□ -1.75
UPF2Q9HAU5 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.1□□□□□ -1.75
UPF2Q9HAU5 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.1□□□□□ -1.75
UPF2Q9HAU5 GTF2IP7-202ENST00000436677 309 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 COX6CP18-201ENST00000448769 222 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 AC079776.3-201ENST00000450665 370 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 CFTRP1-201ENST00000456646 183 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.1□□□□□ -1.75
UPF2Q9HAU5 AC011979.1-201ENST00000472300 483 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.1□□□□□ -1.75
UPF2Q9HAU5 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.1□□□□□ -1.75
UPF2Q9HAU5 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.1□□□□□ -1.75
UPF2Q9HAU5 AC113347.3-201ENST00000509113 148 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 OR5H4P-201ENST00000510851 923 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 AC108043.1-201ENST00000512696 574 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.1□□□□□ -1.75
UPF2Q9HAU5 RNU6-1129P-201ENST00000515964 104 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 RN7SKP82-201ENST00000516786 223 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 AC245166.1-201ENST00000521012 253 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 COX6B1P6-201ENST00000522347 255 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.1□□□□□ -1.75
UPF2Q9HAU5 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.1□□□□□ -1.75
UPF2Q9HAU5 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.1□□□□□ -1.75
UPF2Q9HAU5 AC067852.4-201ENST00000590314 478 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 VN1R88P-201ENST00000596787 292 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 AL360219.1-201ENST00000610230 366 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 AP000676.3-201ENST00000623299 569 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 AC092608.3-201ENST00000625017 386 ntBASIC4.1□□□□□ -1.75
UPF2Q9HAU5 U6.98-201ENST00000637157 84 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms