Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 EZH2P1-201ENST00000431167 291 ntBASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 AC087650.1-201ENST00000431445 468 ntBASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 USP9YP35-201ENST00000435696 412 ntBASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 SDCBPP1-201ENST00000440192 890 ntBASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 AC091951.3-201ENST00000504093 246 ntBASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 RNA5SP468-201ENST00000516782 93 ntBASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 AP003730.1-201ENST00000524605 285 ntBASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 HIGD1AP10-201ENST00000527837 282 ntBASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 SNRPGP16-201ENST00000533275 226 ntBASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 FAM60BP-201ENST00000578364 658 ntBASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 AC023575.1-201ENST00000580510 358 ntBASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 AC006116.5-201ENST00000591936 559 ntBASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 AC006254.3-201ENST00000603353 884 ntBASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 AC119501.1-201ENST00000603646 475 ntBASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 AL158042.1-201ENST00000605338 460 ntBASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 AL390208.1-201ENST00000605885 644 ntBASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 AL022578.1-201ENST00000439330 1433 ntBASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 AC091152.2-201ENST00000591628 2569 ntBASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
CCDC68Q9H2F9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC68Q9H2F9 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC68Q9H2F9 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC68Q9H2F9 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC68Q9H2F9 RPL7AP73-201ENST00000413490 353 ntBASIC4□□□□□ -1.77
CCDC68Q9H2F9 HIGD1AP4-201ENST00000430194 280 ntBASIC4□□□□□ -1.77
CCDC68Q9H2F9 MTCO2P20-201ENST00000437339 673 ntBASIC4□□□□□ -1.77
CCDC68Q9H2F9 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4□□□□□ -1.77
CCDC68Q9H2F9 NUTF2P3-201ENST00000448540 384 ntBASIC4□□□□□ -1.77
CCDC68Q9H2F9 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4□□□□□ -1.77
CCDC68Q9H2F9 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4□□□□□ -1.77
CCDC68Q9H2F9 RN7SL860P-201ENST00000473738 223 ntBASIC4□□□□□ -1.77
CCDC68Q9H2F9 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4□□□□□ -1.77
CCDC68Q9H2F9 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4□□□□□ -1.77
CCDC68Q9H2F9 AC021146.8-201ENST00000507455 733 ntBASIC4□□□□□ -1.77
CCDC68Q9H2F9 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC68Q9H2F9 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4□□□□□ -1.77
CCDC68Q9H2F9 SNORA31.9-201ENST00000516429 84 ntBASIC4□□□□□ -1.77
CCDC68Q9H2F9 PDCL2P2-201ENST00000533651 189 ntBASIC4□□□□□ -1.77
CCDC68Q9H2F9 AC084824.1-201ENST00000550917 1005 ntBASIC4□□□□□ -1.77
CCDC68Q9H2F9 CYCSP2-201ENST00000558168 301 ntBASIC4□□□□□ -1.77
CCDC68Q9H2F9 AC022968.1-201ENST00000567372 442 ntBASIC4□□□□□ -1.77
CCDC68Q9H2F9 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4□□□□□ -1.77
CCDC68Q9H2F9 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4□□□□□ -1.77
CCDC68Q9H2F9 MIR3138-201ENST00000585238 82 ntBASIC4□□□□□ -1.77
CCDC68Q9H2F9 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4□□□□□ -1.77
CCDC68Q9H2F9 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC68Q9H2F9 AC092653.1-201ENST00000608509 531 ntBASIC4□□□□□ -1.77
CCDC68Q9H2F9 AL391497.1-201ENST00000608671 547 ntBASIC4□□□□□ -1.77
CCDC68Q9H2F9 AL355810.1-201ENST00000614629 552 ntBASIC4□□□□□ -1.77
CCDC68Q9H2F9 XIST_intron.1-201ENST00000619444 68 ntBASIC4□□□□□ -1.77
CCDC68Q9H2F9 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC68Q9H2F9 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4□□□□□ -1.77
CCDC68Q9H2F9 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4□□□□□ -1.77
CCDC68Q9H2F9 AC138915.3-201ENST00000562908 1389 ntBASIC4□□□□□ -1.77
CCDC68Q9H2F9 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 RNU6-952P-201ENST00000391164 108 ntBASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 ATP5F1P4-201ENST00000397288 746 ntBASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 RN7SKP33-201ENST00000410942 340 ntBASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 AL590103.1-201ENST00000434488 307 ntBASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 MTCYBP45-201ENST00000435243 565 ntBASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 AL353691.1-201ENST00000451332 387 ntBASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 RPL23AP31-201ENST00000456160 467 ntBASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 AC020898.1-201ENST00000474167 787 ntBASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 RPL31P61-201ENST00000496160 376 ntBASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC68Q9H2F9 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms