Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 UBE2NP1-201ENST00000545592 458 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AC010198.2-201ENST00000550612 259 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AL163153.1-201ENST00000554223 283 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AC087481.2-201ENST00000565492 330 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 MIR5186-201ENST00000577504 120 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 MIR4425-201ENST00000580572 84 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AC008739.3-201ENST00000603262 127 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AC011816.2-201ENST00000607089 556 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AC008121.2-201ENST00000614647 523 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AL355365.1-201ENST00000616480 294 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AC009318.4-201ENST00000620496 486 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AL590240.3-201ENST00000621416 943 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AL136164.4-201ENST00000625013 2135 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AC017071.1-201ENST00000564407 2204 ntBASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
POLR1EQ9GZS1 AL645568.2-201ENST00000432815 1337 ntBASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 AC244517.1-201ENST00000606030 2086 ntBASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 RPL7P26-201ENST00000333817 754 ntBASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 RNU6-549P-201ENST00000384433 107 ntBASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 MTATP6P19-201ENST00000413797 659 ntBASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 AC127526.1-201ENST00000417526 366 ntBASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 AC044797.1-201ENST00000445744 679 ntBASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 VN1R34P-201ENST00000447387 883 ntBASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 RPL26P28-201ENST00000451325 435 ntBASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 PTGES3P5-201ENST00000455109 434 ntBASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 RN7SL293P-201ENST00000481765 281 ntBASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 VPS26AP1-201ENST00000483197 979 ntBASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 AC113192.3-201ENST00000529152 742 ntBASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 AC126177.3-201ENST00000551839 688 ntBASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 AC093519.1-201ENST00000566109 298 ntBASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 MIR4474-201ENST00000579189 78 ntBASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 MIR1254-2-201ENST00000579553 63 ntBASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 AL390240.1-201ENST00000612950 384 ntBASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 BX649567.1-201ENST00000642071 1134 ntBASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 AL356274.2-201ENST00000624379 3752 ntBASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 AL049781.1-201ENST00000623195 3585 ntBASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 RIOK3P1-201ENST00000418778 1528 ntBASIC3.44□□□□□ -1.86
POLR1EQ9GZS1 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 RNA5SP119-201ENST00000362715 117 ntBASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 RNA5SP197-201ENST00000363357 119 ntBASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 SNORA48.7-201ENST00000391302 135 ntBASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 AL591034.1-201ENST00000407447 340 ntBASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 RPS23P3-201ENST00000470993 430 ntBASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 AP002884.2-201ENST00000471647 395 ntBASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 AC017015.1-201ENST00000477387 286 ntBASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 AC108078.3-201ENST00000502633 489 ntBASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 AC093767.1-201ENST00000504523 156 ntBASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 APOOP4-201ENST00000513530 597 ntBASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 RN7SKP60-201ENST00000516985 239 ntBASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 RNA5SP135-201ENST00000517019 125 ntBASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 DUXAP2-201ENST00000519198 589 ntBASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 AP000790.1-201ENST00000528891 737 ntBASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 OR4R2P-201ENST00000530815 597 ntBASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 AP000619.3-201ENST00000535634 1127 ntBASIC3.43□□□□□ -1.86
POLR1EQ9GZS1 AC006518.2-201ENST00000542513 940 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms