Protein–RNA interactions for Protein: Q9C0C4

SEMA4C, Semaphorin-4C, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4CQ9C0C4 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.33□□□□□ -1.72
SEMA4CQ9C0C4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SEMA4CQ9C0C4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 RNA5SP283-201ENST00000365604 119 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 OR52E6-202ENST00000379946 954 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 MIR181A1-201ENST00000385026 110 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 RNA5SP372-201ENST00000390836 115 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 U8.14-201ENST00000390843 143 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 RNU6-876P-201ENST00000391295 104 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 Z98745.1-201ENST00000402553 494 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AL121834.1-202ENST00000404494 277 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 PPIAP31-201ENST00000405422 495 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 FCF1P10-201ENST00000407590 479 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 RNU6-628P-201ENST00000410675 107 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 VDAC1P9-201ENST00000412766 841 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AC008280.1-201ENST00000418851 412 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AL358934.1-201ENST00000432346 324 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 RAB11AP1-201ENST00000442978 646 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 MTATP6P30-201ENST00000443540 664 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 NDUFA5P7-201ENST00000452914 242 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AL354710.1-201ENST00000453641 246 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 UQCRHP4-201ENST00000471686 272 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AC117522.1-201ENST00000509821 380 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AC026726.1-201ENST00000512859 601 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AC010342.1-201ENST00000514047 877 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 RNU6-528P-201ENST00000516926 100 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AP003730.1-201ENST00000524605 285 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AC141257.3-201ENST00000572906 215 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 MIR5697-201ENST00000578045 78 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 BNIP3P23-201ENST00000599655 511 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AC131902.3-201ENST00000611767 581 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AC116447.1-201ENST00000613153 453 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AC023509.5-201ENST00000617434 807 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AC243756.2-201ENST00000618406 463 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AC006338.1-201ENST00000618453 749 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AC231657.1-201ENST00000624313 397 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AC068880.5-201ENST00000624331 290 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AC120349.2-201ENST00000625002 298 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AC093591.3-201ENST00000634516 308 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 AC009229.4-201ENST00000623854 1947 ntBASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
SEMA4CQ9C0C4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.31□□□□□ -1.72
SEMA4CQ9C0C4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.31□□□□□ -1.72
SEMA4CQ9C0C4 AL136164.3-201ENST00000624429 3978 ntBASIC4.31□□□□□ -1.72
SEMA4CQ9C0C4 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SEMA4CQ9C0C4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SEMA4CQ9C0C4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SEMA4CQ9C0C4 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.31□□□□□ -1.72
SEMA4CQ9C0C4 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
SEMA4CQ9C0C4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.31□□□□□ -1.72
SEMA4CQ9C0C4 AC009313.2-201ENST00000417893 1941 ntBASIC4.31□□□□□ -1.72
SEMA4CQ9C0C4 AL592437.2-201ENST00000421655 2434 ntBASIC4.31□□□□□ -1.72
SEMA4CQ9C0C4 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.31□□□□□ -1.72
SEMA4CQ9C0C4 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SEMA4CQ9C0C4 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SEMA4CQ9C0C4 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SEMA4CQ9C0C4 Y_RNA.25-201ENST00000362528 102 ntBASIC4.31□□□□□ -1.72
SEMA4CQ9C0C4 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.31□□□□□ -1.72
SEMA4CQ9C0C4 SUGT1P1-201ENST00000379514 476 ntBASIC4.31□□□□□ -1.72
SEMA4CQ9C0C4 Y_RNA.450-201ENST00000384198 113 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms