Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 RNA5SP375-201ENST00000362975 119 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 RNU5B-2P-201ENST00000363036 113 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 U8.4-201ENST00000363626 134 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 RNU6-1078P-201ENST00000364522 103 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 RNU6-641P-201ENST00000384006 107 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 SNORD20-201ENST00000384550 80 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 RNU6-95P-201ENST00000384697 107 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 U3.20-201ENST00000390909 217 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 RNA5SP219-201ENST00000390940 113 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 MRPL35P1-201ENST00000404272 572 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 RNU4-64P-201ENST00000410795 131 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 RPL17P36-201ENST00000420302 549 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 AC245884.2-201ENST00000426257 404 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 AL049745.1-201ENST00000433953 286 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 MRPS21P3-201ENST00000436696 262 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 AP000936.3-201ENST00000438127 255 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 AL031659.1-201ENST00000447075 539 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 AC022431.1-201ENST00000450941 438 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 AL035090.1-201ENST00000454835 332 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 RNU6-1218P-201ENST00000458990 108 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 AC092865.4-201ENST00000477936 615 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 IGKV2-38-201ENST00000517443 247 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 HMGN1P28-201ENST00000521340 364 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 AC090615.1-201ENST00000577519 154 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CNTNAP3Q9BZ76 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 HSPA8P14-201ENST00000552265 1805 ntBASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 MAPK10-287ENST00000641217 3037 ntBASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 SNX18P3-202ENST00000565670 1750 ntBASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 AC022034.1-201ENST00000512867 2156 ntBASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 MIR411-201ENST00000362239 96 ntBASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 SNORD62.1-201ENST00000362541 86 ntBASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 Y_RNA.54-201ENST00000362766 105 ntBASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 RNU6-1059P-201ENST00000363752 98 ntBASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 RNU4-50P-201ENST00000364361 141 ntBASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 U3.11-201ENST00000364476 212 ntBASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 SNORA62-201ENST00000365493 153 ntBASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 RNU6-842P-201ENST00000384269 107 ntBASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 Y_RNA.526-201ENST00000384572 110 ntBASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 RNU6-306P-201ENST00000384617 107 ntBASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 RNU6-959P-201ENST00000384671 107 ntBASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 RNA5SP156-201ENST00000410250 110 ntBASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 NMD3P2-201ENST00000421815 761 ntBASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 OR3D1P-201ENST00000438288 955 ntBASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 AC098869.1-201ENST00000481627 292 ntBASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 RN7SL382P-201ENST00000482631 282 ntBASIC5.85□□□□□ -1.47
CNTNAP3Q9BZ76 AC005726.1-201ENST00000494679 427 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms