Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 MTND5P11-201ENST00000511037 1812 ntBASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
RPAP1Q9BWH6 AC000403.1-201ENST00000613696 3585 ntBASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 SNORA71.1-201ENST00000364523 117 ntBASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 U3.15-201ENST00000365398 212 ntBASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 MIR124-3-201ENST00000384866 87 ntBASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 HMGB3P31-201ENST00000413333 595 ntBASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 AC245054.2-201ENST00000415639 319 ntBASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 AC068135.1-201ENST00000446164 246 ntBASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 AC005002.1-201ENST00000447458 540 ntBASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 AC089999.1-201ENST00000460336 374 ntBASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 RPL37P6-202ENST00000464216 403 ntBASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 RPS29P26-201ENST00000477483 171 ntBASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 AC087276.1-201ENST00000529659 480 ntBASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 OR5D17P-201ENST00000531492 978 ntBASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 SNRPGP1-201ENST00000553864 222 ntBASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 AC027104.1-201ENST00000563702 681 ntBASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 AC107294.1-201ENST00000609524 467 ntBASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 AL163152.1-201ENST00000642001 374 ntBASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RPAP1Q9BWH6 AC005183.1-201ENST00000603687 1979 ntBASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 RNA5SP126-201ENST00000365092 109 ntBASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 RNA5SP80-201ENST00000410475 111 ntBASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 RPL7P8-201ENST00000411964 730 ntBASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 AC092832.1-201ENST00000422934 400 ntBASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 SETP5-201ENST00000437270 562 ntBASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 SNRPGP3-201ENST00000469405 227 ntBASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 KC877373.1-201ENST00000479066 408 ntBASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 AC008565.1-201ENST00000509046 885 ntBASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 AC133963.2-201ENST00000513686 578 ntBASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 AC091826.1-201ENST00000514065 313 ntBASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 AC139103.1-201ENST00000534696 1030 ntBASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 AC010653.1-201ENST00000571108 881 ntBASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 MIR3162-201ENST00000581818 82 ntBASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 OR2AS2P-201ENST00000606902 342 ntBASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 AC107294.3-201ENST00000609211 526 ntBASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 MIR6864-201ENST00000617935 70 ntBASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 AC007998.5-201ENST00000622938 237 ntBASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 AC024595.1-201ENST00000623088 387 ntBASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 AL137790.1-201ENST00000634283 177 ntBASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 AC104446.1-201ENST00000613728 1321 ntBASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.68□□□□□ -1.82
RPAP1Q9BWH6 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 SNORD67-201ENST00000390833 111 ntBASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 AL139281.1-201ENST00000422120 335 ntBASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 ELOCP6-201ENST00000429066 328 ntBASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 ELOCP12-201ENST00000458706 328 ntBASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 RN7SL20P-201ENST00000488827 297 ntBASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 OR2A20P-203ENST00000498397 1268 ntBASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 AC005351.1-201ENST00000511152 786 ntBASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 RNA5SP356-201ENST00000515972 94 ntBASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 AC083923.1-201ENST00000523708 376 ntBASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 STMN1P1-201ENST00000617809 440 ntBASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 DCAF13P1-201ENST00000495256 1330 ntBASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 MTCO1P18-201ENST00000455518 1419 ntBASIC3.67□□□□□ -1.82
RPAP1Q9BWH6 AC008264.2-201ENST00000610193 3731 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms