Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 COX7BP2-201ENST00000437976 242 ntBASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 ISCA1P2-201ENST00000438679 421 ntBASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 MTND1P31-201ENST00000449206 961 ntBASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 RFC5P1-201ENST00000454419 874 ntBASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 MTCYBP35-201ENST00000503630 1137 ntBASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 MTATP6P15-201ENST00000527233 835 ntBASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 MIR5187-201ENST00000583479 76 ntBASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 AC231759.1-201ENST00000616455 597 ntBASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 FP236240.3-201ENST00000623061 327 ntBASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CCDC28BQ9BUN5 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 MAPK10-362ENST00000641864 4484 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 FAM133CP-201ENST00000332869 704 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 RNU6-115P-201ENST00000364310 107 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 SNORA62-201ENST00000365493 153 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 SUGT1P1-201ENST00000379514 476 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 RNU6-83P-201ENST00000384568 112 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 MIR591-201ENST00000385290 95 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 AL445189.1-201ENST00000405722 338 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 AL133264.1-201ENST00000407157 562 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 RPL18P10-201ENST00000425606 538 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 MTCO2P20-201ENST00000437339 673 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 AC093155.1-201ENST00000440164 826 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 AC239367.2-201ENST00000447309 705 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 COX6CP18-201ENST00000448769 222 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 RPS15AP1-201ENST00000457423 391 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 RPS7P7-201ENST00000463499 571 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 AC011352.3-201ENST00000505162 593 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 RNA5SP385-201ENST00000515947 110 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 RNU6-885P-201ENST00000516607 104 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 C1GALT1P3-201ENST00000522049 819 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 UBTFL10-201ENST00000528532 562 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 AP000619.3-201ENST00000535634 1127 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 MTCYBP27-201ENST00000555160 670 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 AC087465.1-201ENST00000560574 245 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 AC093519.1-201ENST00000566109 298 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 AL606490.9-201ENST00000603331 271 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 AC008745.1-201ENST00000604064 271 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 AL591034.3-201ENST00000605511 685 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 TUSC7.1-201ENST00000610969 165 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 AC005344.1-201ENST00000613391 459 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 PLCE1P1-201ENST00000622094 305 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 AP003355.3-201ENST00000623465 114 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 MIR1322-201ENST00000638013 71 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 AC107081.3-201ENST00000612715 2034 ntBASIC3.43□□□□□ -1.86
CCDC28BQ9BUN5 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AC016716.1-201ENST00000265882 708 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms