Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PCGF1Q9BSM1 AC021755.1-201ENST00000559747 1447 ntBASIC3.75□□□□□ -1.81
PCGF1Q9BSM1 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.75□□□□□ -1.81
PCGF1Q9BSM1 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
PCGF1Q9BSM1 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCGF1Q9BSM1 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
PCGF1Q9BSM1 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PCGF1Q9BSM1 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
PCGF1Q9BSM1 RAD17P1-201ENST00000418130 2042 ntBASIC3.75□□□□□ -1.81
PCGF1Q9BSM1 EXOC5P1-201ENST00000510543 1969 ntBASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 AC090337.1-201ENST00000579651 2074 ntBASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 RNA5SP258-201ENST00000362750 119 ntBASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 U8.14-201ENST00000390843 143 ntBASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 RNU6-837P-201ENST00000391056 108 ntBASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 U3.22-201ENST00000391120 215 ntBASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 RAB28P1-201ENST00000411517 641 ntBASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 MTCO1P17-201ENST00000411522 491 ntBASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 PGBD4P8-201ENST00000412993 562 ntBASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 AC092447.6-201ENST00000414578 210 ntBASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 AL389915.1-201ENST00000422463 466 ntBASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 RPL23AP25-201ENST00000430973 463 ntBASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 RPS3AP54-201ENST00000435535 734 ntBASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 AC091862.1-201ENST00000438016 1100 ntBASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 BMI1P1-201ENST00000445879 941 ntBASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 SNORA70.14-201ENST00000516205 110 ntBASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 RNU6-714P-201ENST00000516963 103 ntBASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 AC064807.4-201ENST00000607201 407 ntBASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 AC012360.2-201ENST00000609349 391 ntBASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 AL158063.1-201ENST00000615349 536 ntBASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 AC004777.1-201ENST00000624317 287 ntBASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 OR56B2P-202ENST00000641377 2453 ntBASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
PCGF1Q9BSM1 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 AL049780.3-201ENST00000624612 1583 ntBASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 OR11H4-201ENST00000315409 1082 ntBASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 SNORA62-201ENST00000365493 153 ntBASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 Y_RNA.548-201ENST00000384656 105 ntBASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 RPS3AP26-201ENST00000398259 784 ntBASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 AIMP1P1-201ENST00000418670 937 ntBASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 RPL21P91-201ENST00000429231 479 ntBASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 MTCO2P16-201ENST00000436962 677 ntBASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 CDC27P1-201ENST00000445384 715 ntBASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 snoU13.8-201ENST00000458890 104 ntBASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 AP001025.2-201ENST00000490908 477 ntBASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 MTCO3P28-201ENST00000513351 515 ntBASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 IGLV3-26-201ENST00000520756 302 ntBASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 AC107016.1-201ENST00000550463 337 ntBASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 SETP7-201ENST00000552169 453 ntBASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 AC012414.6-201ENST00000568241 401 ntBASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 AC090616.5-202ENST00000582111 297 ntBASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 MIR4307-201ENST00000582802 84 ntBASIC3.73□□□□□ -1.81
PCGF1Q9BSM1 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms