Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PHOX2BQ99453 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PHOX2BQ99453 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PHOX2BQ99453 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PHOX2BQ99453 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PHOX2BQ99453 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PHOX2BQ99453 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PHOX2BQ99453 BIN2P1-201ENST00000504996 1530 ntBASIC6.49□□□□□ -1.37
PHOX2BQ99453 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PHOX2BQ99453 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PHOX2BQ99453 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
PHOX2BQ99453 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PHOX2BQ99453 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC6.49□□□□□ -1.37
PHOX2BQ99453 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PHOX2BQ99453 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.49□□□□□ -1.37
PHOX2BQ99453 AC119674.1-204ENST00000641348 1343 ntBASIC6.49□□□□□ -1.37
PHOX2BQ99453 AP005435.3-201ENST00000531260 3198 ntBASIC6.49□□□□□ -1.37
PHOX2BQ99453 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PHOX2BQ99453 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PHOX2BQ99453 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
PHOX2BQ99453 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PHOX2BQ99453 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
PHOX2BQ99453 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PHOX2BQ99453 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PHOX2BQ99453 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
PHOX2BQ99453 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PHOX2BQ99453 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.48□□□□□ -1.37
PHOX2BQ99453 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.48□□□□□ -1.37
PHOX2BQ99453 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PHOX2BQ99453 MIR335-201ENST00000362173 94 ntBASIC6.48□□□□□ -1.37
PHOX2BQ99453 RNU6-371P-201ENST00000364283 108 ntBASIC6.48□□□□□ -1.37
PHOX2BQ99453 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PHOX2BQ99453 RNU1-74P-201ENST00000384108 171 ntBASIC6.48□□□□□ -1.37
PHOX2BQ99453 Y_RNA.471-201ENST00000384312 102 ntBASIC6.48□□□□□ -1.37
PHOX2BQ99453 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
PHOX2BQ99453 RNU4-64P-201ENST00000410795 131 ntBASIC6.48□□□□□ -1.37
PHOX2BQ99453 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.48□□□□□ -1.37
PHOX2BQ99453 AL663061.1-201ENST00000416625 580 ntBASIC6.48□□□□□ -1.37
PHOX2BQ99453 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC6.48□□□□□ -1.37
PHOX2BQ99453 AC007098.1-201ENST00000420122 367 ntBASIC6.48□□□□□ -1.37
PHOX2BQ99453 SDAD1P3-201ENST00000427380 333 ntBASIC6.48□□□□□ -1.37
PHOX2BQ99453 C4BPAP2-201ENST00000428434 478 ntBASIC6.48□□□□□ -1.37
PHOX2BQ99453 RPL10P17-201ENST00000453852 316 ntBASIC6.48□□□□□ -1.37
PHOX2BQ99453 HMGB1P25-201ENST00000468402 607 ntBASIC6.48□□□□□ -1.37
PHOX2BQ99453 AC008953.1-201ENST00000497334 318 ntBASIC6.48□□□□□ -1.37
PHOX2BQ99453 NDUFB4P9-201ENST00000511646 388 ntBASIC6.48□□□□□ -1.37
PHOX2BQ99453 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC6.48□□□□□ -1.37
PHOX2BQ99453 AC091144.1-201ENST00000519573 138 ntBASIC6.48□□□□□ -1.37
PHOX2BQ99453 AC087369.1-201ENST00000520775 996 ntBASIC6.48□□□□□ -1.37
PHOX2BQ99453 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.48□□□□□ -1.37
PHOX2BQ99453 AC104576.1-201ENST00000524225 88 ntBASIC6.48□□□□□ -1.37
PHOX2BQ99453 CBX3P8-201ENST00000532412 525 ntBASIC6.48□□□□□ -1.37
PHOX2BQ99453 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.48□□□□□ -1.37
PHOX2BQ99453 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.48□□□□□ -1.37
PHOX2BQ99453 AC008962.1-201ENST00000605729 304 ntBASIC6.48□□□□□ -1.37
PHOX2BQ99453 AC007619.2-201ENST00000605743 379 ntBASIC6.48□□□□□ -1.37
PHOX2BQ99453 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PHOX2BQ99453 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.48□□□□□ -1.37
PHOX2BQ99453 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC6.48□□□□□ -1.37
PHOX2BQ99453 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.48□□□□□ -1.37
PHOX2BQ99453 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.48□□□□□ -1.37
PHOX2BQ99453 SNX18P3-202ENST00000565670 1750 ntBASIC6.48□□□□□ -1.37
PHOX2BQ99453 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.48□□□□□ -1.37
PHOX2BQ99453 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PHOX2BQ99453 AC079753.1-201ENST00000623243 3868 ntBASIC6.48□□□□□ -1.37
PHOX2BQ99453 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PHOX2BQ99453 ZNF72P-201ENST00000425869 1908 ntBASIC6.48□□□□□ -1.37
PHOX2BQ99453 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.48□□□□□ -1.37
PHOX2BQ99453 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.48□□□□□ -1.37
PHOX2BQ99453 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PHOX2BQ99453 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
PHOX2BQ99453 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.48□□□□□ -1.37
PHOX2BQ99453 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PHOX2BQ99453 AL672167.1-205ENST00000641112 3080 ntBASIC6.48□□□□□ -1.37
PHOX2BQ99453 FAM91A3P-201ENST00000456826 2544 ntBASIC6.47□□□□□ -1.37
PHOX2BQ99453 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
PHOX2BQ99453 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.47□□□□□ -1.37
PHOX2BQ99453 AC138907.8-201ENST00000623981 2256 ntBASIC6.47□□□□□ -1.37
PHOX2BQ99453 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
PHOX2BQ99453 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PHOX2BQ99453 AL591848.4-201ENST00000567832 3472 ntBASIC6.47□□□□□ -1.37
PHOX2BQ99453 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
PHOX2BQ99453 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.47□□□□□ -1.37
PHOX2BQ99453 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.47□□□□□ -1.37
PHOX2BQ99453 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PHOX2BQ99453 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PHOX2BQ99453 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PHOX2BQ99453 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PHOX2BQ99453 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PHOX2BQ99453 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
PHOX2BQ99453 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
PHOX2BQ99453 AC019155.1-201ENST00000382242 574 ntBASIC6.47□□□□□ -1.37
PHOX2BQ99453 MIR199B-201ENST00000384849 110 ntBASIC6.47□□□□□ -1.37
PHOX2BQ99453 AC013442.1-201ENST00000397347 228 ntBASIC6.47□□□□□ -1.37
PHOX2BQ99453 AL109941.1-201ENST00000401925 229 ntBASIC6.47□□□□□ -1.37
PHOX2BQ99453 SDHDP6-201ENST00000414693 480 ntBASIC6.47□□□□□ -1.37
PHOX2BQ99453 AC092809.3-201ENST00000415453 231 ntBASIC6.47□□□□□ -1.37
PHOX2BQ99453 BX323845.3-201ENST00000428215 527 ntBASIC6.47□□□□□ -1.37
PHOX2BQ99453 HMGB1P27-201ENST00000431429 603 ntBASIC6.47□□□□□ -1.37
PHOX2BQ99453 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms