Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.41□□□□□ -1.86
RPRD1AQ96P16 AL591503.2-201ENST00000442314 1005 ntBASIC3.41□□□□□ -1.86
RPRD1AQ96P16 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.41□□□□□ -1.86
RPRD1AQ96P16 CDC42P1-201ENST00000456658 548 ntBASIC3.41□□□□□ -1.86
RPRD1AQ96P16 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.41□□□□□ -1.86
RPRD1AQ96P16 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.41□□□□□ -1.86
RPRD1AQ96P16 MTCO3P44-201ENST00000510977 541 ntBASIC3.41□□□□□ -1.86
RPRD1AQ96P16 MTND2P31-201ENST00000512602 616 ntBASIC3.41□□□□□ -1.86
RPRD1AQ96P16 RNA5SP380-201ENST00000517190 98 ntBASIC3.41□□□□□ -1.86
RPRD1AQ96P16 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.41□□□□□ -1.86
RPRD1AQ96P16 NIFKP8-201ENST00000560500 874 ntBASIC3.41□□□□□ -1.86
RPRD1AQ96P16 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.41□□□□□ -1.86
RPRD1AQ96P16 AC037471.2-201ENST00000564941 598 ntBASIC3.41□□□□□ -1.86
RPRD1AQ96P16 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.41□□□□□ -1.86
RPRD1AQ96P16 BPTFP1-201ENST00000579209 492 ntBASIC3.41□□□□□ -1.86
RPRD1AQ96P16 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.41□□□□□ -1.86
RPRD1AQ96P16 MIR4425-201ENST00000580572 84 ntBASIC3.41□□□□□ -1.86
RPRD1AQ96P16 AC098483.2-201ENST00000603158 454 ntBASIC3.41□□□□□ -1.86
RPRD1AQ96P16 AC113368.1-201ENST00000603736 382 ntBASIC3.41□□□□□ -1.86
RPRD1AQ96P16 AC105227.2-201ENST00000615075 605 ntBASIC3.41□□□□□ -1.86
RPRD1AQ96P16 SNORD39.4-201ENST00000620099 78 ntBASIC3.41□□□□□ -1.86
RPRD1AQ96P16 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.41□□□□□ -1.86
RPRD1AQ96P16 AC020923.1-201ENST00000624021 917 ntBASIC3.41□□□□□ -1.86
RPRD1AQ96P16 AC097372.4-201ENST00000625025 466 ntBASIC3.41□□□□□ -1.86
RPRD1AQ96P16 ZNF849P-201ENST00000594711 1566 ntBASIC3.41□□□□□ -1.86
RPRD1AQ96P16 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RPRD1AQ96P16 AL355578.1-201ENST00000607405 1328 ntBASIC3.41□□□□□ -1.86
RPRD1AQ96P16 AC110774.1-201ENST00000623567 2018 ntBASIC3.41□□□□□ -1.86
RPRD1AQ96P16 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
RPRD1AQ96P16 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
RPRD1AQ96P16 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RPRD1AQ96P16 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.4□□□□□ -1.87
RPRD1AQ96P16 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
RPRD1AQ96P16 MIR30E-201ENST00000362104 92 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 RNU6-609P-201ENST00000365459 107 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RPRD1AQ96P16 AL583834.1-201ENST00000406943 343 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 RNA5SP56-201ENST00000410277 118 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.4□□□□□ -1.87
RPRD1AQ96P16 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.4□□□□□ -1.87
RPRD1AQ96P16 AC012065.2-201ENST00000421295 375 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.4□□□□□ -1.87
RPRD1AQ96P16 AC096632.1-201ENST00000427395 310 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 DPPA2P1-201ENST00000428060 556 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 ELOCP13-201ENST00000443934 329 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.4□□□□□ -1.87
RPRD1AQ96P16 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.4□□□□□ -1.87
RPRD1AQ96P16 BTF3P5-201ENST00000457252 467 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 NAP1L1P3-201ENST00000462291 880 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 RPL32P14-201ENST00000463196 378 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 RPL6P9-201ENST00000466502 859 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 HMGB1P22-201ENST00000505315 124 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 MIR2276-201ENST00000516886 89 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 RN7SKP289-201ENST00000517244 295 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 MTCO1P4-201ENST00000520516 1409 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 AP004371.1-201ENST00000525240 214 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 OR8K4P-201ENST00000534608 872 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.4□□□□□ -1.87
RPRD1AQ96P16 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.4□□□□□ -1.87
RPRD1AQ96P16 AC012182.1-201ENST00000570133 895 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.4□□□□□ -1.87
RPRD1AQ96P16 MTCO1P40-201ENST00000574371 625 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.4□□□□□ -1.87
RPRD1AQ96P16 AL031985.2-201ENST00000600955 480 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 AC005776.1-201ENST00000603164 290 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 AC073657.2-201ENST00000605661 303 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 AC096577.2-201ENST00000611455 153 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 uc_338.1-201ENST00000612113 180 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 AL512506.1-201ENST00000613918 449 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 AC073592.7-201ENST00000623659 507 ntBASIC3.4□□□□□ -1.87
RPRD1AQ96P16 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RPRD1AQ96P16 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
RPRD1AQ96P16 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.4□□□□□ -1.87
RPRD1AQ96P16 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RPRD1AQ96P16 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPRD1AQ96P16 AC117529.2-201ENST00000512159 2068 ntBASIC3.39□□□□□ -1.87
RPRD1AQ96P16 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
RPRD1AQ96P16 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
RPRD1AQ96P16 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPRD1AQ96P16 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPRD1AQ96P16 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RPRD1AQ96P16 RPL7P26-201ENST00000333817 754 ntBASIC3.39□□□□□ -1.87
RPRD1AQ96P16 RNU1-70P-201ENST00000362618 164 ntBASIC3.39□□□□□ -1.87
RPRD1AQ96P16 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.39□□□□□ -1.87
RPRD1AQ96P16 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RPRD1AQ96P16 MT-TC-201ENST00000387405 66 ntBASIC3.39□□□□□ -1.87
RPRD1AQ96P16 AP002784.2-201ENST00000397300 549 ntBASIC3.39□□□□□ -1.87
RPRD1AQ96P16 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.39□□□□□ -1.87
RPRD1AQ96P16 AC063979.1-201ENST00000415539 377 ntBASIC3.39□□□□□ -1.87
RPRD1AQ96P16 AC233981.1-201ENST00000423224 461 ntBASIC3.39□□□□□ -1.87
RPRD1AQ96P16 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.39□□□□□ -1.87
RPRD1AQ96P16 RPL21P66-201ENST00000426566 466 ntBASIC3.39□□□□□ -1.87
RPRD1AQ96P16 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.39□□□□□ -1.87
RPRD1AQ96P16 RPL17P35-201ENST00000432217 549 ntBASIC3.39□□□□□ -1.87
RPRD1AQ96P16 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.39□□□□□ -1.87
RPRD1AQ96P16 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.39□□□□□ -1.87
RPRD1AQ96P16 AC006539.3-201ENST00000454258 129 ntBASIC3.39□□□□□ -1.87
RPRD1AQ96P16 snoU13.22-201ENST00000459428 104 ntBASIC3.39□□□□□ -1.87
RPRD1AQ96P16 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.39□□□□□ -1.87
RPRD1AQ96P16 AC110794.1-201ENST00000505816 425 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms