Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 RNU6-1073P-201ENST00000517182 106 ntBASIC2.98□□□□□ -1.93
CCDC42Q96M95 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC42Q96M95 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC42Q96M95 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
CCDC42Q96M95 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC42Q96M95 AC006539.2-201ENST00000601729 572 ntBASIC2.98□□□□□ -1.93
CCDC42Q96M95 AC008739.3-201ENST00000603262 127 ntBASIC2.98□□□□□ -1.93
CCDC42Q96M95 AC119501.1-201ENST00000603646 475 ntBASIC2.98□□□□□ -1.93
CCDC42Q96M95 AC245389.1-201ENST00000605141 529 ntBASIC2.98□□□□□ -1.93
CCDC42Q96M95 RPL23AP88-201ENST00000605759 454 ntBASIC2.98□□□□□ -1.93
CCDC42Q96M95 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC42Q96M95 MIR3651-201ENST00000630427 90 ntBASIC2.98□□□□□ -1.93
CCDC42Q96M95 FAM35BP-202ENST00000497389 3337 ntBASIC2.98□□□□□ -1.93
CCDC42Q96M95 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
CCDC42Q96M95 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC42Q96M95 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
CCDC42Q96M95 MIR592-201ENST00000384959 97 ntBASIC2.97□□□□□ -1.93
CCDC42Q96M95 RPL19P1-201ENST00000411635 428 ntBASIC2.97□□□□□ -1.93
CCDC42Q96M95 LINC01881-201ENST00000416103 412 ntBASIC2.97□□□□□ -1.93
CCDC42Q96M95 MTCO3P4-201ENST00000419236 787 ntBASIC2.97□□□□□ -1.93
CCDC42Q96M95 AC005517.2-201ENST00000424673 553 ntBASIC2.97□□□□□ -1.93
CCDC42Q96M95 RPL36AP6-201ENST00000435770 321 ntBASIC2.97□□□□□ -1.93
CCDC42Q96M95 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC42Q96M95 Z99714.1-201ENST00000450463 807 ntBASIC2.97□□□□□ -1.93
CCDC42Q96M95 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.97□□□□□ -1.93
CCDC42Q96M95 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC42Q96M95 AC117522.3-201ENST00000507974 584 ntBASIC2.97□□□□□ -1.93
CCDC42Q96M95 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC42Q96M95 AC074250.1-201ENST00000511117 192 ntBASIC2.97□□□□□ -1.93
CCDC42Q96M95 OR4A45P-201ENST00000529954 901 ntBASIC2.97□□□□□ -1.93
CCDC42Q96M95 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
CCDC42Q96M95 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC42Q96M95 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC42Q96M95 AC005229.3-201ENST00000603438 323 ntBASIC2.97□□□□□ -1.93
CCDC42Q96M95 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
CCDC42Q96M95 AL359535.1-201ENST00000612100 1087 ntBASIC2.97□□□□□ -1.93
CCDC42Q96M95 AC012314.7-201ENST00000619693 93 ntBASIC2.97□□□□□ -1.93
CCDC42Q96M95 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC42Q96M95 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.97□□□□□ -1.93
CCDC42Q96M95 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC42Q96M95 AC009501.3-201ENST00000605001 1352 ntBASIC2.97□□□□□ -1.93
CCDC42Q96M95 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC42Q96M95 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC42Q96M95 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC42Q96M95 SNORD21-201ENST00000383953 95 ntBASIC2.96□□□□□ -1.94
CCDC42Q96M95 SNORA48.5-201ENST00000391143 135 ntBASIC2.96□□□□□ -1.94
CCDC42Q96M95 AL356967.1-201ENST00000406305 431 ntBASIC2.96□□□□□ -1.94
CCDC42Q96M95 MRPL50P2-201ENST00000416821 482 ntBASIC2.96□□□□□ -1.94
CCDC42Q96M95 SSXP9-201ENST00000417503 292 ntBASIC2.96□□□□□ -1.94
CCDC42Q96M95 AL513175.2-201ENST00000422071 443 ntBASIC2.96□□□□□ -1.94
CCDC42Q96M95 NIPA2P1-201ENST00000426223 976 ntBASIC2.96□□□□□ -1.94
CCDC42Q96M95 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC42Q96M95 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC42Q96M95 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC42Q96M95 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC42Q96M95 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC42Q96M95 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC42Q96M95 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC42Q96M95 AP000926.3-201ENST00000497201 299 ntBASIC2.96□□□□□ -1.94
CCDC42Q96M95 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC42Q96M95 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC42Q96M95 AP003717.3-201ENST00000544832 1180 ntBASIC2.96□□□□□ -1.94
CCDC42Q96M95 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC42Q96M95 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC42Q96M95 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.96□□□□□ -1.94
CCDC42Q96M95 AC008277.2-201ENST00000605196 797 ntBASIC2.96□□□□□ -1.94
CCDC42Q96M95 YPEL5P2-201ENST00000605553 359 ntBASIC2.96□□□□□ -1.94
CCDC42Q96M95 AC138473.1-201ENST00000605717 526 ntBASIC2.96□□□□□ -1.94
CCDC42Q96M95 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC42Q96M95 AC009487.2-201ENST00000420969 6821 ntBASIC2.95□□□□□ -1.94
CCDC42Q96M95 SAGE4P-201ENST00000442271 3381 ntBASIC2.95□□□□□ -1.94
CCDC42Q96M95 SNORA11C-201ENST00000408532 129 ntBASIC2.95□□□□□ -1.94
CCDC42Q96M95 MTCYBP24-201ENST00000420387 1106 ntBASIC2.95□□□□□ -1.94
CCDC42Q96M95 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC42Q96M95 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC42Q96M95 RPL23AP74-201ENST00000437246 471 ntBASIC2.95□□□□□ -1.94
CCDC42Q96M95 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC42Q96M95 AC112653.1-201ENST00000443851 386 ntBASIC2.95□□□□□ -1.94
CCDC42Q96M95 HMGB1P5-202ENST00000451497 985 ntBASIC2.95□□□□□ -1.94
CCDC42Q96M95 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.95□□□□□ -1.94
CCDC42Q96M95 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC42Q96M95 AL358832.1-201ENST00000497800 389 ntBASIC2.95□□□□□ -1.94
CCDC42Q96M95 SNORD59.2-201ENST00000516873 68 ntBASIC2.95□□□□□ -1.94
CCDC42Q96M95 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.95□□□□□ -1.94
CCDC42Q96M95 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC42Q96M95 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC42Q96M95 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC42Q96M95 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC42Q96M95 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC42Q96M95 AC005412.1-201ENST00000580812 1049 ntBASIC2.95□□□□□ -1.94
CCDC42Q96M95 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
CCDC42Q96M95 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC42Q96M95 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.95□□□□□ -1.94
CCDC42Q96M95 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC42Q96M95 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC42Q96M95 AC006378.2-201ENST00000623178 2476 ntBASIC2.95□□□□□ -1.94
CCDC42Q96M95 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CCDC42Q96M95 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC42Q96M95 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC42Q96M95 MIR422A-201ENST00000362286 90 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms