Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 BEND7P1-201ENST00000422058 457 ntBASIC4.44□□□□□ -1.7
CCDC138Q96M89 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC138Q96M89 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC138Q96M89 RPL23AP25-201ENST00000430973 463 ntBASIC4.44□□□□□ -1.7
CCDC138Q96M89 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC138Q96M89 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC138Q96M89 GDI2P2-201ENST00000445131 608 ntBASIC4.44□□□□□ -1.7
CCDC138Q96M89 AC073264.2-201ENST00000448886 166 ntBASIC4.44□□□□□ -1.7
CCDC138Q96M89 AL162591.2-201ENST00000449634 317 ntBASIC4.44□□□□□ -1.7
CCDC138Q96M89 AC104308.1-201ENST00000454621 333 ntBASIC4.44□□□□□ -1.7
CCDC138Q96M89 RPL23AP72-201ENST00000492447 435 ntBASIC4.44□□□□□ -1.7
CCDC138Q96M89 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC138Q96M89 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC138Q96M89 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC138Q96M89 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC138Q96M89 AC017037.2-201ENST00000513850 890 ntBASIC4.44□□□□□ -1.7
CCDC138Q96M89 RNA5SP446-201ENST00000515955 82 ntBASIC4.44□□□□□ -1.7
CCDC138Q96M89 AP003497.1-201ENST00000528472 562 ntBASIC4.44□□□□□ -1.7
CCDC138Q96M89 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC138Q96M89 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC138Q96M89 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC138Q96M89 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC138Q96M89 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC138Q96M89 AP005136.1-201ENST00000579765 429 ntBASIC4.44□□□□□ -1.7
CCDC138Q96M89 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.44□□□□□ -1.7
CCDC138Q96M89 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC138Q96M89 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC138Q96M89 AC092354.2-201ENST00000607786 514 ntBASIC4.44□□□□□ -1.7
CCDC138Q96M89 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC138Q96M89 TUG1_1.1-201ENST00000610654 145 ntBASIC4.44□□□□□ -1.7
CCDC138Q96M89 C2orf27A-204ENST00000623058 969 ntBASIC4.44□□□□□ -1.7
CCDC138Q96M89 AC025048.6-202ENST00000627667 438 ntBASIC4.44□□□□□ -1.7
CCDC138Q96M89 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CCDC138Q96M89 CCT4P2-201ENST00000233836 1548 ntBASIC4.44□□□□□ -1.7
CCDC138Q96M89 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC138Q96M89 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC138Q96M89 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC138Q96M89 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.44□□□□□ -1.7
CCDC138Q96M89 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC138Q96M89 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.44□□□□□ -1.7
CCDC138Q96M89 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC138Q96M89 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC138Q96M89 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC138Q96M89 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC138Q96M89 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC138Q96M89 AP002001.2-201ENST00000529025 1469 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 AC012618.3-205ENST00000637896 1496 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC138Q96M89 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC138Q96M89 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CCDC138Q96M89 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC138Q96M89 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC138Q96M89 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CCDC138Q96M89 AL121657.1-201ENST00000327215 531 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 U3.4-201ENST00000363352 213 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 SNORA7.2-201ENST00000364446 145 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 RNU6-1181P-201ENST00000384191 106 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 SNORD3H-201ENST00000384486 214 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 MIR3074-201ENST00000384885 81 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 U3.20-201ENST00000390909 217 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 AL359704.1-201ENST00000411586 781 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 RAC1P3-201ENST00000416129 580 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC138Q96M89 RPL21P112-201ENST00000434403 463 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC138Q96M89 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC138Q96M89 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC138Q96M89 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 AC093278.1-201ENST00000494700 600 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC138Q96M89 AC023141.12-201ENST00000512399 199 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 SNORA31.20-201ENST00000517111 133 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC138Q96M89 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CCDC138Q96M89 MTND4LP18-201ENST00000526864 291 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC138Q96M89 MED28P5-201ENST00000528254 438 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC138Q96M89 AC135001.1-201ENST00000544546 283 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC138Q96M89 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
CCDC138Q96M89 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC138Q96M89 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC138Q96M89 RPL7P50-201ENST00000600588 727 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 AC068790.5-201ENST00000602741 355 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 AC025946.2-201ENST00000603398 234 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 AL358072.1-201ENST00000604156 575 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 AC020634.1-201ENST00000608701 549 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 MIR6780A-201ENST00000615089 68 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 AC027807.2-201ENST00000616099 408 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 AC004825.2-201ENST00000616634 455 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 AC091905.2-201ENST00000623143 306 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC138Q96M89 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC138Q96M89 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC138Q96M89 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC138Q96M89 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CCDC138Q96M89 AC011266.1-201ENST00000624119 3569 ntBASIC4.43□□□□□ -1.7
CCDC138Q96M89 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms