Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 AC023128.2-201ENST00000420880 1223 ntBASIC4.01□□□□□ -1.77
CCDC7Q96M83 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC7Q96M83 AL590762.3-201ENST00000436372 640 ntBASIC4.01□□□□□ -1.77
CCDC7Q96M83 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC7Q96M83 ARL5AP2-201ENST00000444698 533 ntBASIC4.01□□□□□ -1.77
CCDC7Q96M83 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC7Q96M83 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC7Q96M83 HMGB3P21-201ENST00000452483 547 ntBASIC4.01□□□□□ -1.77
CCDC7Q96M83 RPL23AP44-201ENST00000482216 473 ntBASIC4.01□□□□□ -1.77
CCDC7Q96M83 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC7Q96M83 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC7Q96M83 AC010486.1-201ENST00000511793 424 ntBASIC4.01□□□□□ -1.77
CCDC7Q96M83 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC7Q96M83 COX6CP8-201ENST00000522620 226 ntBASIC4.01□□□□□ -1.77
CCDC7Q96M83 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC7Q96M83 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC7Q96M83 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC7Q96M83 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC7Q96M83 AC055876.1-202ENST00000567053 138 ntBASIC4.01□□□□□ -1.77
CCDC7Q96M83 MIR4512-201ENST00000583257 77 ntBASIC4.01□□□□□ -1.77
CCDC7Q96M83 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CCDC7Q96M83 AC093010.3-201ENST00000570269 15214 ntBASIC4□□□□□ -1.77
CCDC7Q96M83 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC7Q96M83 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC7Q96M83 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC7Q96M83 MTND5P11-201ENST00000511037 1812 ntBASIC4□□□□□ -1.77
CCDC7Q96M83 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4□□□□□ -1.77
CCDC7Q96M83 RNU4-82P-201ENST00000362443 140 ntBASIC4□□□□□ -1.77
CCDC7Q96M83 RNU6-1005P-201ENST00000384519 107 ntBASIC4□□□□□ -1.77
CCDC7Q96M83 AL445529.1-201ENST00000398713 389 ntBASIC4□□□□□ -1.77
CCDC7Q96M83 RPS4XP8-201ENST00000402039 771 ntBASIC4□□□□□ -1.77
CCDC7Q96M83 MTCO3P31-201ENST00000405526 789 ntBASIC4□□□□□ -1.77
CCDC7Q96M83 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4□□□□□ -1.77
CCDC7Q96M83 AL121882.1-201ENST00000422893 417 ntBASIC4□□□□□ -1.77
CCDC7Q96M83 OOSP1P1-201ENST00000423265 274 ntBASIC4□□□□□ -1.77
CCDC7Q96M83 MTATP6P11-201ENST00000428071 670 ntBASIC4□□□□□ -1.77
CCDC7Q96M83 ELOCP11-201ENST00000436690 332 ntBASIC4□□□□□ -1.77
CCDC7Q96M83 ELOCP16-201ENST00000444494 332 ntBASIC4□□□□□ -1.77
CCDC7Q96M83 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4□□□□□ -1.77
CCDC7Q96M83 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4□□□□□ -1.77
CCDC7Q96M83 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4□□□□□ -1.77
CCDC7Q96M83 AC023050.1-201ENST00000498198 304 ntBASIC4□□□□□ -1.77
CCDC7Q96M83 SNORD116-26-201ENST00000516006 96 ntBASIC4□□□□□ -1.77
CCDC7Q96M83 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4□□□□□ -1.77
CCDC7Q96M83 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4□□□□□ -1.77
CCDC7Q96M83 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC7Q96M83 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4□□□□□ -1.77
CCDC7Q96M83 OR4U1P-201ENST00000554958 912 ntBASIC4□□□□□ -1.77
CCDC7Q96M83 PCNAP1-202ENST00000595299 752 ntBASIC4□□□□□ -1.77
CCDC7Q96M83 VN1R90P-201ENST00000595717 726 ntBASIC4□□□□□ -1.77
CCDC7Q96M83 PLCE1P1-201ENST00000622094 305 ntBASIC4□□□□□ -1.77
CCDC7Q96M83 AC083865.1-201ENST00000636634 831 ntBASIC4□□□□□ -1.77
CCDC7Q96M83 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4□□□□□ -1.77
CCDC7Q96M83 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC7Q96M83 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC7Q96M83 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC7Q96M83 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC7Q96M83 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC7Q96M83 PNRC2P1-201ENST00000423940 420 ntBASIC3.99□□□□□ -1.77
CCDC7Q96M83 AC005189.1-201ENST00000431286 310 ntBASIC3.99□□□□□ -1.77
CCDC7Q96M83 VDAC1P3-201ENST00000434069 851 ntBASIC3.99□□□□□ -1.77
CCDC7Q96M83 RNFT1P2-201ENST00000443064 757 ntBASIC3.99□□□□□ -1.77
CCDC7Q96M83 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC7Q96M83 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC7Q96M83 AC108938.1-201ENST00000451204 136 ntBASIC3.99□□□□□ -1.77
CCDC7Q96M83 NIPA2P5-201ENST00000452282 464 ntBASIC3.99□□□□□ -1.77
CCDC7Q96M83 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC7Q96M83 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC7Q96M83 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC7Q96M83 RPL23AP92-201ENST00000603609 255 ntBASIC3.99□□□□□ -1.77
CCDC7Q96M83 AP006248.2-201ENST00000623309 592 ntBASIC3.99□□□□□ -1.77
CCDC7Q96M83 AC073592.7-201ENST00000623659 507 ntBASIC3.99□□□□□ -1.77
CCDC7Q96M83 AC009039.2-201ENST00000624524 529 ntBASIC3.99□□□□□ -1.77
CCDC7Q96M83 MIR6715B-201ENST00000637172 77 ntBASIC3.99□□□□□ -1.77
CCDC7Q96M83 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC7Q96M83 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
CCDC7Q96M83 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC7Q96M83 MTND5P27-201ENST00000428871 1720 ntBASIC3.98□□□□□ -1.77
CCDC7Q96M83 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC7Q96M83 AL133412.1-201ENST00000380194 2992 ntBASIC3.98□□□□□ -1.77
CCDC7Q96M83 SNORA18.3-201ENST00000384122 132 ntBASIC3.98□□□□□ -1.77
CCDC7Q96M83 MIR181A2-201ENST00000384863 110 ntBASIC3.98□□□□□ -1.77
CCDC7Q96M83 RNU6-796P-201ENST00000391086 107 ntBASIC3.98□□□□□ -1.77
CCDC7Q96M83 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC7Q96M83 UBE2V1P11-201ENST00000411559 285 ntBASIC3.98□□□□□ -1.77
CCDC7Q96M83 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC7Q96M83 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC7Q96M83 SLC31A1P1-201ENST00000451221 567 ntBASIC3.98□□□□□ -1.77
CCDC7Q96M83 AC233982.1-201ENST00000451247 436 ntBASIC3.98□□□□□ -1.77
CCDC7Q96M83 AC003982.1-202ENST00000469928 248 ntBASIC3.98□□□□□ -1.77
CCDC7Q96M83 AP000893.1-201ENST00000474462 794 ntBASIC3.98□□□□□ -1.77
CCDC7Q96M83 RN7SL283P-201ENST00000489055 303 ntBASIC3.98□□□□□ -1.77
CCDC7Q96M83 MTND3P24-201ENST00000506306 329 ntBASIC3.98□□□□□ -1.77
CCDC7Q96M83 AC093755.1-201ENST00000512950 1023 ntBASIC3.98□□□□□ -1.77
CCDC7Q96M83 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC7Q96M83 AC090751.1-201ENST00000566966 267 ntBASIC3.98□□□□□ -1.77
CCDC7Q96M83 HMGB1P6-201ENST00000569046 646 ntBASIC3.98□□□□□ -1.77
CCDC7Q96M83 MIR5047-201ENST00000579212 100 ntBASIC3.98□□□□□ -1.77
CCDC7Q96M83 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC7Q96M83 AL020991.1-201ENST00000612314 373 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms