Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RPL35AP31-201ENST00000418340 337 ntBASIC6.66□□□□□ -1.34
LRCH3Q96II8 RPS12P5-201ENST00000423449 371 ntBASIC6.66□□□□□ -1.34
LRCH3Q96II8 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC6.66□□□□□ -1.34
LRCH3Q96II8 SNORD121B-201ENST00000458838 81 ntBASIC6.66□□□□□ -1.34
LRCH3Q96II8 AL136126.1-201ENST00000473603 402 ntBASIC6.66□□□□□ -1.34
LRCH3Q96II8 AC092865.4-201ENST00000477936 615 ntBASIC6.66□□□□□ -1.34
LRCH3Q96II8 AC007686.1-201ENST00000488511 463 ntBASIC6.66□□□□□ -1.34
LRCH3Q96II8 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.66□□□□□ -1.34
LRCH3Q96II8 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC6.66□□□□□ -1.34
LRCH3Q96II8 DPPA3P2-201ENST00000553589 478 ntBASIC6.66□□□□□ -1.34
LRCH3Q96II8 AC106785.4-201ENST00000569492 412 ntBASIC6.66□□□□□ -1.34
LRCH3Q96II8 OR1F2P-201ENST00000570470 933 ntBASIC6.66□□□□□ -1.34
LRCH3Q96II8 HNRNPCP4-201ENST00000571636 900 ntBASIC6.66□□□□□ -1.34
LRCH3Q96II8 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC6.66□□□□□ -1.34
LRCH3Q96II8 MIR376A1-201ENST00000616574 68 ntBASIC6.66□□□□□ -1.34
LRCH3Q96II8 AL590240.4-201ENST00000616908 390 ntBASIC6.66□□□□□ -1.34
LRCH3Q96II8 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
LRCH3Q96II8 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.66□□□□□ -1.34
LRCH3Q96II8 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LRCH3Q96II8 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
LRCH3Q96II8 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LRCH3Q96II8 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LRCH3Q96II8 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LRCH3Q96II8 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
LRCH3Q96II8 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.66□□□□□ -1.34
LRCH3Q96II8 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
LRCH3Q96II8 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
LRCH3Q96II8 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
LRCH3Q96II8 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
LRCH3Q96II8 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
LRCH3Q96II8 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
LRCH3Q96II8 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC6.65□□□□□ -1.34
LRCH3Q96II8 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.65□□□□□ -1.34
LRCH3Q96II8 AC022325.1-201ENST00000502748 2199 ntBASIC6.65□□□□□ -1.34
LRCH3Q96II8 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
LRCH3Q96II8 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
LRCH3Q96II8 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
LRCH3Q96II8 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
LRCH3Q96II8 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC6.65□□□□□ -1.34
LRCH3Q96II8 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
LRCH3Q96II8 AC006484.1-201ENST00000435086 1884 ntBASIC6.65□□□□□ -1.34
LRCH3Q96II8 XIAPP3-201ENST00000312918 795 ntBASIC6.65□□□□□ -1.34
LRCH3Q96II8 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
LRCH3Q96II8 MIR541-201ENST00000401360 84 ntBASIC6.65□□□□□ -1.34
LRCH3Q96II8 RNU6-394P-201ENST00000410735 107 ntBASIC6.65□□□□□ -1.34
LRCH3Q96II8 PSMD10P3-201ENST00000437000 448 ntBASIC6.65□□□□□ -1.34
LRCH3Q96II8 PPIAP10-201ENST00000438675 458 ntBASIC6.65□□□□□ -1.34
LRCH3Q96II8 AL390119.1-201ENST00000440329 312 ntBASIC6.65□□□□□ -1.34
LRCH3Q96II8 CRYGGP-201ENST00000443337 145 ntBASIC6.65□□□□□ -1.34
LRCH3Q96II8 AL513124.1-201ENST00000450410 614 ntBASIC6.65□□□□□ -1.34
LRCH3Q96II8 AC239809.1-201ENST00000450470 217 ntBASIC6.65□□□□□ -1.34
LRCH3Q96II8 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.65□□□□□ -1.34
LRCH3Q96II8 RN7SL172P-201ENST00000460535 303 ntBASIC6.65□□□□□ -1.34
LRCH3Q96II8 AC087477.1-201ENST00000465747 340 ntBASIC6.65□□□□□ -1.34
LRCH3Q96II8 RPS4XP1-201ENST00000482189 787 ntBASIC6.65□□□□□ -1.34
LRCH3Q96II8 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
LRCH3Q96II8 IGHVII-53-1-201ENST00000519538 255 ntBASIC6.65□□□□□ -1.34
LRCH3Q96II8 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC6.65□□□□□ -1.34
LRCH3Q96II8 MIR4300-201ENST00000581016 96 ntBASIC6.65□□□□□ -1.34
LRCH3Q96II8 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.65□□□□□ -1.34
LRCH3Q96II8 AP000560.1-201ENST00000624150 1937 ntBASIC6.65□□□□□ -1.34
LRCH3Q96II8 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
LRCH3Q96II8 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.35
LRCH3Q96II8 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
LRCH3Q96II8 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
LRCH3Q96II8 AC022034.1-201ENST00000512867 2156 ntBASIC6.65□□□□□ -1.35
LRCH3Q96II8 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
LRCH3Q96II8 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
LRCH3Q96II8 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
LRCH3Q96II8 AC130650.2-201ENST00000618736 2403 ntBASIC6.65□□□□□ -1.35
LRCH3Q96II8 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
LRCH3Q96II8 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.65□□□□□ -1.35
LRCH3Q96II8 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
LRCH3Q96II8 AL592148.3-201ENST00000608771 2646 ntBASIC6.64□□□□□ -1.35
LRCH3Q96II8 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.64□□□□□ -1.35
LRCH3Q96II8 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.64□□□□□ -1.35
LRCH3Q96II8 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
LRCH3Q96II8 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
LRCH3Q96II8 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
LRCH3Q96II8 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
LRCH3Q96II8 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
LRCH3Q96II8 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
LRCH3Q96II8 RNU6-1329P-201ENST00000365664 107 ntBASIC6.64□□□□□ -1.35
LRCH3Q96II8 Y_RNA.458-201ENST00000384240 102 ntBASIC6.64□□□□□ -1.35
LRCH3Q96II8 Y_RNA.541-201ENST00000384640 113 ntBASIC6.64□□□□□ -1.35
LRCH3Q96II8 RN7SKP213-201ENST00000410746 298 ntBASIC6.64□□□□□ -1.35
LRCH3Q96II8 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC6.64□□□□□ -1.35
LRCH3Q96II8 MRPL42P6-201ENST00000486397 371 ntBASIC6.64□□□□□ -1.35
LRCH3Q96II8 RN7SL547P-201ENST00000490793 290 ntBASIC6.64□□□□□ -1.35
LRCH3Q96II8 RPL7P47-201ENST00000497299 556 ntBASIC6.64□□□□□ -1.35
LRCH3Q96II8 AC093767.1-201ENST00000504523 156 ntBASIC6.64□□□□□ -1.35
LRCH3Q96II8 NDUFB4P9-201ENST00000511646 388 ntBASIC6.64□□□□□ -1.35
LRCH3Q96II8 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.64□□□□□ -1.35
LRCH3Q96II8 Y_RNA.710-201ENST00000516975 110 ntBASIC6.64□□□□□ -1.35
LRCH3Q96II8 AC104576.1-201ENST00000524225 88 ntBASIC6.64□□□□□ -1.35
LRCH3Q96II8 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.64□□□□□ -1.35
LRCH3Q96II8 AMZ2P1-203ENST00000565833 850 ntBASIC6.64□□□□□ -1.35
LRCH3Q96II8 AC136932.1-201ENST00000574771 208 ntBASIC6.64□□□□□ -1.35
LRCH3Q96II8 MIR4273-201ENST00000582824 84 ntBASIC6.64□□□□□ -1.35
LRCH3Q96II8 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms