Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.76□□□□□ -1.97
LMX1AQ8TE12 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LMX1AQ8TE12 ZNF92P1Y-201ENST00000415010 1191 ntBASIC2.76□□□□□ -1.97
LMX1AQ8TE12 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.76□□□□□ -1.97
LMX1AQ8TE12 FTH1P1-201ENST00000437933 532 ntBASIC2.76□□□□□ -1.97
LMX1AQ8TE12 MTCYBP31-201ENST00000438855 1122 ntBASIC2.76□□□□□ -1.97
LMX1AQ8TE12 ARL5AP2-201ENST00000444698 533 ntBASIC2.76□□□□□ -1.97
LMX1AQ8TE12 AC125238.1-201ENST00000448842 249 ntBASIC2.76□□□□□ -1.97
LMX1AQ8TE12 RPS17P11-201ENST00000474297 293 ntBASIC2.76□□□□□ -1.97
LMX1AQ8TE12 RPS27AP1-201ENST00000475545 471 ntBASIC2.76□□□□□ -1.97
LMX1AQ8TE12 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.76□□□□□ -1.97
LMX1AQ8TE12 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.76□□□□□ -1.97
LMX1AQ8TE12 AC034159.1-201ENST00000513885 583 ntBASIC2.76□□□□□ -1.97
LMX1AQ8TE12 RPL12P22-201ENST00000519073 490 ntBASIC2.76□□□□□ -1.97
LMX1AQ8TE12 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.76□□□□□ -1.97
LMX1AQ8TE12 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
LMX1AQ8TE12 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.76□□□□□ -1.97
LMX1AQ8TE12 TRAV37-201ENST00000553906 342 ntBASIC2.76□□□□□ -1.97
LMX1AQ8TE12 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.76□□□□□ -1.97
LMX1AQ8TE12 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.76□□□□□ -1.97
LMX1AQ8TE12 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.76□□□□□ -1.97
LMX1AQ8TE12 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.76□□□□□ -1.97
LMX1AQ8TE12 AC245128.3-201ENST00000594721 748 ntBASIC2.76□□□□□ -1.97
LMX1AQ8TE12 PCNAP1-202ENST00000595299 752 ntBASIC2.76□□□□□ -1.97
LMX1AQ8TE12 AC069304.3-201ENST00000603938 1084 ntBASIC2.76□□□□□ -1.97
LMX1AQ8TE12 AC073111.2-201ENST00000605657 1075 ntBASIC2.76□□□□□ -1.97
LMX1AQ8TE12 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC2.76□□□□□ -1.97
LMX1AQ8TE12 MIR6864-201ENST00000617935 70 ntBASIC2.76□□□□□ -1.97
LMX1AQ8TE12 AC006111.3-201ENST00000622137 383 ntBASIC2.76□□□□□ -1.97
LMX1AQ8TE12 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
LMX1AQ8TE12 AL157700.1-201ENST00000561973 1432 ntBASIC2.76□□□□□ -1.97
LMX1AQ8TE12 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
LMX1AQ8TE12 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.75□□□□□ -1.97
LMX1AQ8TE12 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LMX1AQ8TE12 MTND4P31-201ENST00000425607 1343 ntBASIC2.75□□□□□ -1.97
LMX1AQ8TE12 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.75□□□□□ -1.97
LMX1AQ8TE12 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.75□□□□□ -1.97
LMX1AQ8TE12 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
LMX1AQ8TE12 RPS4XP8-201ENST00000402039 771 ntBASIC2.75□□□□□ -1.97
LMX1AQ8TE12 RNA5SP293-201ENST00000410527 113 ntBASIC2.75□□□□□ -1.97
LMX1AQ8TE12 RPL31P2-201ENST00000413849 377 ntBASIC2.75□□□□□ -1.97
LMX1AQ8TE12 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.75□□□□□ -1.97
LMX1AQ8TE12 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.75□□□□□ -1.97
LMX1AQ8TE12 NPM1P13-201ENST00000452663 865 ntBASIC2.75□□□□□ -1.97
LMX1AQ8TE12 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.75□□□□□ -1.97
LMX1AQ8TE12 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.75□□□□□ -1.97
LMX1AQ8TE12 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.75□□□□□ -1.97
LMX1AQ8TE12 TMEM248P1-201ENST00000510579 951 ntBASIC2.75□□□□□ -1.97
LMX1AQ8TE12 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.75□□□□□ -1.97
LMX1AQ8TE12 AC093770.1-201ENST00000511559 571 ntBASIC2.75□□□□□ -1.97
LMX1AQ8TE12 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.75□□□□□ -1.97
LMX1AQ8TE12 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.75□□□□□ -1.97
LMX1AQ8TE12 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.75□□□□□ -1.97
LMX1AQ8TE12 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.75□□□□□ -1.97
LMX1AQ8TE12 AC010928.3-201ENST00000587712 541 ntBASIC2.75□□□□□ -1.97
LMX1AQ8TE12 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.75□□□□□ -1.97
LMX1AQ8TE12 AC113194.1-201ENST00000606037 500 ntBASIC2.75□□□□□ -1.97
LMX1AQ8TE12 AC099778.2-201ENST00000610904 211 ntBASIC2.75□□□□□ -1.97
LMX1AQ8TE12 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.75□□□□□ -1.97
LMX1AQ8TE12 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.75□□□□□ -1.97
LMX1AQ8TE12 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
LMX1AQ8TE12 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LMX1AQ8TE12 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LMX1AQ8TE12 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
LMX1AQ8TE12 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.74□□□□□ -1.97
LMX1AQ8TE12 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LMX1AQ8TE12 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.74□□□□□ -1.97
LMX1AQ8TE12 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
LMX1AQ8TE12 MIR591-201ENST00000385290 95 ntBASIC2.74□□□□□ -1.97
LMX1AQ8TE12 AL360182.1-201ENST00000397433 468 ntBASIC2.74□□□□□ -1.97
LMX1AQ8TE12 AL138827.1-201ENST00000402666 306 ntBASIC2.74□□□□□ -1.97
LMX1AQ8TE12 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.74□□□□□ -1.97
LMX1AQ8TE12 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.74□□□□□ -1.97
LMX1AQ8TE12 RFESDP1-201ENST00000422350 461 ntBASIC2.74□□□□□ -1.97
LMX1AQ8TE12 ARL5AP4-201ENST00000430731 512 ntBASIC2.74□□□□□ -1.97
LMX1AQ8TE12 AC112653.1-201ENST00000443851 386 ntBASIC2.74□□□□□ -1.97
LMX1AQ8TE12 RPL34P26-201ENST00000445636 354 ntBASIC2.74□□□□□ -1.97
LMX1AQ8TE12 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.74□□□□□ -1.97
LMX1AQ8TE12 UQCRHP3-201ENST00000451503 251 ntBASIC2.74□□□□□ -1.97
LMX1AQ8TE12 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.74□□□□□ -1.97
LMX1AQ8TE12 AC096992.1-201ENST00000459808 709 ntBASIC2.74□□□□□ -1.97
LMX1AQ8TE12 AC092185.1-201ENST00000491371 97 ntBASIC2.74□□□□□ -1.97
LMX1AQ8TE12 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.74□□□□□ -1.97
LMX1AQ8TE12 IGKV2-36-201ENST00000519999 223 ntBASIC2.74□□□□□ -1.97
LMX1AQ8TE12 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.74□□□□□ -1.97
LMX1AQ8TE12 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.74□□□□□ -1.97
LMX1AQ8TE12 OR6C73P-201ENST00000546432 358 ntBASIC2.74□□□□□ -1.97
LMX1AQ8TE12 AC074029.1-201ENST00000552531 1044 ntBASIC2.74□□□□□ -1.97
LMX1AQ8TE12 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.74□□□□□ -1.97
LMX1AQ8TE12 RPL23AP92-201ENST00000603609 255 ntBASIC2.74□□□□□ -1.97
LMX1AQ8TE12 IGHVIII-44-202ENST00000636235 289 ntBASIC2.74□□□□□ -1.97
LMX1AQ8TE12 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
LMX1AQ8TE12 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
LMX1AQ8TE12 SAGE4P-201ENST00000442271 3381 ntBASIC2.74□□□□□ -1.97
LMX1AQ8TE12 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LMX1AQ8TE12 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
LMX1AQ8TE12 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.73□□□□□ -1.97
LMX1AQ8TE12 AC116096.1-201ENST00000566804 2314 ntBASIC2.73□□□□□ -1.97
LMX1AQ8TE12 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
LMX1AQ8TE12 RNA5SP295-201ENST00000362655 121 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms