Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 SNORA25.6-201ENST00000364121 118 ntBASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 RNU6-146P-201ENST00000384602 108 ntBASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 SNORA46-201ENST00000384762 135 ntBASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 AL138787.1-202ENST00000437804 898 ntBASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 AC239798.3-201ENST00000454459 408 ntBASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 AC007621.1-201ENST00000604544 437 ntBASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 SNORA26.7-201ENST00000391288 122 ntBASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 SDCBPP3-201ENST00000419629 891 ntBASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 HMGB1P25-201ENST00000468402 607 ntBASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 GTF2H2B-203ENST00000508065 1432 ntBASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 RN7SKP123-201ENST00000410732 291 ntBASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 TRIAP1P1-201ENST00000427062 225 ntBASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 DPPA2P1-201ENST00000428060 556 ntBASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 IGHV3-76-201ENST00000522465 295 ntBASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 YWHAZP1-201ENST00000556286 722 ntBASIC1.78□□□□□ -2.12
ALMS1Q8TCU4 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.78□□□□□ -2.13
ALMS1Q8TCU4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
ALMS1Q8TCU4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
ALMS1Q8TCU4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 AL513043.1-201ENST00000439124 535 ntBASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 AC003982.1-202ENST00000469928 248 ntBASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 FABP5P12-201ENST00000515543 389 ntBASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 RNA5SP445-201ENST00000515889 115 ntBASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 AC034268.2-201ENST00000571784 482 ntBASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 NTAN1P1-201ENST00000603150 646 ntBASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 RNU6-618P-201ENST00000363518 112 ntBASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 FCF1P1-201ENST00000432690 571 ntBASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 ST13P14-201ENST00000474095 734 ntBASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 AC022884.3-201ENST00000579571 248 ntBASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 AC004943.3-201ENST00000624116 600 ntBASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 AC087565.3-202ENST00000642085 1603 ntBASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 AC006020.1-201ENST00000420179 1854 ntBASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 MIR181A2-201ENST00000384863 110 ntBASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 RPL7P53-201ENST00000421245 739 ntBASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 YWHAZP7-201ENST00000436906 631 ntBASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 AC108471.1-201ENST00000513977 287 ntBASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 AL391156.1-201ENST00000554965 554 ntBASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 GMCL1P2-201ENST00000605230 823 ntBASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 SNORA80E-201ENST00000384744 137 ntBASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 AL135786.1-201ENST00000415892 214 ntBASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 SNRPGP3-201ENST00000469405 227 ntBASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 AL512643.1-201ENST00000635735 524 ntBASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.77□□□□□ -2.13
ALMS1Q8TCU4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 MIR592-201ENST00000384959 97 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 SNORA17.3-201ENST00000391159 129 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 YPEL5P1-201ENST00000419731 367 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 Z99127.2-201ENST00000441426 334 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 KCTD9P5-201ENST00000504141 1170 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 AC008277.2-201ENST00000605196 797 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 NF1P10-201ENST00000613227 742 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 Xist_exon1.1-201ENST00000618930 85 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms