Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 UBE2V1P13-201ENST00000436983 439 ntBASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 AL445687.1-201ENST00000439946 251 ntBASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 SNRPGP6-201ENST00000451124 220 ntBASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 UBDP1-202ENST00000457888 382 ntBASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 AC090515.1-201ENST00000465295 476 ntBASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 AL135752.1-201ENST00000479477 471 ntBASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 RN7SKP18-201ENST00000516005 275 ntBASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 RN7SKP272-201ENST00000516988 232 ntBASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 AP000867.2-201ENST00000532468 320 ntBASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 TRAV28-201ENST00000557548 323 ntBASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 AP005205.1-201ENST00000563503 508 ntBASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 RN7SL339P-201ENST00000580597 296 ntBASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 AL356280.1-201ENST00000603614 379 ntBASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 AC090115.4-201ENST00000609970 188 ntBASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 BX664608.1-201ENST00000610519 487 ntBASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 VN1R74P-201ENST00000613259 503 ntBASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 HMGB1P24-202ENST00000615653 685 ntBASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 SDAD1P2-201ENST00000441308 2028 ntBASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SPTSSBQ8NFR3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AC005336.3-201ENST00000623833 2679 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 SNORD9-201ENST00000362566 104 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 RNA5SP258-201ENST00000362750 119 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 RNA5SP197-201ENST00000363357 119 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 MIR181A2-201ENST00000384863 110 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 MIR524-201ENST00000385242 87 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AL022722.2-201ENST00000402519 180 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 RNU6-233P-201ENST00000410845 141 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AL356379.1-201ENST00000414105 126 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 CHEK2P5-201ENST00000423877 246 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AL365496.1-201ENST00000426885 215 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AL606490.7-201ENST00000433136 191 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AC073143.1-201ENST00000436316 395 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AL772161.1-201ENST00000439130 476 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AC108734.1-201ENST00000439549 399 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AL162389.1-201ENST00000449233 177 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 RPS15AP34-201ENST00000487776 387 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 TPT1P3-201ENST00000492841 512 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 PRELID3BP6-201ENST00000503839 571 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 RGS4-207ENST00000527809 817 ntTSL 4 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AP000857.1-201ENST00000532151 543 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AC137768.1-201ENST00000549998 553 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 MTCYBP28-201ENST00000566728 1132 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 ISCA1P3-201ENST00000577104 373 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AC053481.3-201ENST00000577881 843 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 RN7SL703P-201ENST00000578485 302 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 RN7SL600P-201ENST00000581811 299 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AC020914.6-201ENST00000594327 272 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 NRBF2P5-201ENST00000603087 788 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AL136363.1-201ENST00000605349 337 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 RNU1-30P-201ENST00000606575 163 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AC087359.1-201ENST00000508335 1740 ntBASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC1.54□□□□□ -2.16
SPTSSBQ8NFR3 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
SPTSSBQ8NFR3 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms