Protein–RNA interactions for Protein: Q8N6Y0

USHBP1, Usher syndrome type-1C protein-binding protein 1, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1Q8N6Y0 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 RPL21P91-201ENST00000429231 479 ntBASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 AL356276.2-201ENST00000435919 558 ntBASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 AC104850.1-201ENST00000435940 476 ntBASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 Z95327.1-201ENST00000446082 482 ntBASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 AL162151.2-201ENST00000448875 158 ntBASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 RPS20P24-201ENST00000457473 361 ntBASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 AC018710.1-201ENST00000506509 158 ntBASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 POU5F1P7-201ENST00000508759 541 ntBASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 KCTD9P2-201ENST00000512203 1013 ntBASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 RNA5SP446-201ENST00000515955 82 ntBASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 ARL2BPP5-201ENST00000523141 481 ntBASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 MIR3682-201ENST00000581338 84 ntBASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 AC104010.1-201ENST00000616889 150 ntBASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 MIR6875-201ENST00000617506 72 ntBASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 AC009159.1-201ENST00000618386 642 ntBASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 AC010266.2-201ENST00000564741 3255 ntBASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.74□□□□□ -1.49
USHBP1Q8N6Y0 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 DHX9P1-201ENST00000436565 3076 ntBASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 AL731532.2-201ENST00000623542 1953 ntBASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 RLIMP1-201ENST00000339626 1680 ntBASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 RNU6-533P-201ENST00000384144 107 ntBASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 AL445189.1-201ENST00000405722 338 ntBASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 RPL21P65-201ENST00000406094 466 ntBASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 VN1R8P-201ENST00000407739 893 ntBASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 RPS3AP9-201ENST00000417027 792 ntBASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 AC109583.1-201ENST00000432156 268 ntBASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 AL358934.1-201ENST00000432346 324 ntBASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 FCF1P1-201ENST00000432690 571 ntBASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 MTND6P13-201ENST00000443510 523 ntBASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 AC012170.1-201ENST00000495139 359 ntBASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 SCARNA15.1-201ENST00000516384 125 ntBASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 RNU1-45P-201ENST00000517191 141 ntBASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 AC025678.1-201ENST00000567861 338 ntBASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 RN7SL703P-201ENST00000578485 302 ntBASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 AC245389.1-201ENST00000605141 529 ntBASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 AC097468.3-201ENST00000607956 456 ntBASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 AL021997.2-201ENST00000615674 271 ntBASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
USHBP1Q8N6Y0 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
USHBP1Q8N6Y0 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
USHBP1Q8N6Y0 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.72□□□□□ -1.49
USHBP1Q8N6Y0 SMG1P4-204ENST00000523028 4131 ntBASIC5.72□□□□□ -1.49
USHBP1Q8N6Y0 AC119744.1-201ENST00000454746 1715 ntBASIC5.72□□□□□ -1.49
USHBP1Q8N6Y0 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.72□□□□□ -1.49
USHBP1Q8N6Y0 RNU6-115P-201ENST00000364310 107 ntBASIC5.72□□□□□ -1.49
USHBP1Q8N6Y0 RPL31P1-201ENST00000398116 372 ntBASIC5.72□□□□□ -1.49
USHBP1Q8N6Y0 AL136131.1-201ENST00000406079 803 ntBASIC5.72□□□□□ -1.49
USHBP1Q8N6Y0 RNU6-272P-201ENST00000411028 104 ntBASIC5.72□□□□□ -1.49
USHBP1Q8N6Y0 ZNF90P2-204ENST00000419323 1075 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms