Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS8Q8N3P4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS8Q8N3P4 AC009487.4-201ENST00000624969 3585 ntBASIC3.67□□□□□ -1.82
VPS8Q8N3P4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS8Q8N3P4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS8Q8N3P4 SNORA70B-201ENST00000384210 135 ntBASIC3.67□□□□□ -1.82
VPS8Q8N3P4 RN7SKP223-201ENST00000410582 62 ntBASIC3.67□□□□□ -1.82
VPS8Q8N3P4 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS8Q8N3P4 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS8Q8N3P4 HIGD1AP2-201ENST00000446367 280 ntBASIC3.67□□□□□ -1.82
VPS8Q8N3P4 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS8Q8N3P4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS8Q8N3P4 AC009163.5-201ENST00000575421 637 ntBASIC3.67□□□□□ -1.82
VPS8Q8N3P4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.67□□□□□ -1.82
VPS8Q8N3P4 AC103710.3-201ENST00000608157 948 ntBASIC3.67□□□□□ -1.82
VPS8Q8N3P4 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.67□□□□□ -1.82
VPS8Q8N3P4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
VPS8Q8N3P4 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.66□□□□□ -1.82
VPS8Q8N3P4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.66□□□□□ -1.82
VPS8Q8N3P4 RN7SKP283-201ENST00000517197 270 ntBASIC3.66□□□□□ -1.82
VPS8Q8N3P4 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VPS8Q8N3P4 MIR6766-201ENST00000622641 72 ntBASIC3.66□□□□□ -1.82
VPS8Q8N3P4 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
VPS8Q8N3P4 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
VPS8Q8N3P4 AC098826.1-201ENST00000433943 471 ntBASIC3.65□□□□□ -1.83
VPS8Q8N3P4 Z99127.2-201ENST00000441426 334 ntBASIC3.65□□□□□ -1.83
VPS8Q8N3P4 AC008413.1-201ENST00000511864 177 ntBASIC3.65□□□□□ -1.83
VPS8Q8N3P4 RNA5SP281-201ENST00000516504 135 ntBASIC3.65□□□□□ -1.83
VPS8Q8N3P4 OR5BN1P-201ENST00000532955 829 ntBASIC3.65□□□□□ -1.83
VPS8Q8N3P4 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS8Q8N3P4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS8Q8N3P4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS8Q8N3P4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS8Q8N3P4 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.65□□□□□ -1.83
VPS8Q8N3P4 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.65□□□□□ -1.83
VPS8Q8N3P4 AL160394.1-201ENST00000624765 724 ntBASIC3.65□□□□□ -1.83
VPS8Q8N3P4 PHKBP1-201ENST00000450951 1951 ntBASIC3.64□□□□□ -1.83
VPS8Q8N3P4 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VPS8Q8N3P4 AC021755.1-201ENST00000559747 1447 ntBASIC3.64□□□□□ -1.83
VPS8Q8N3P4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
VPS8Q8N3P4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS8Q8N3P4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.64□□□□□ -1.83
VPS8Q8N3P4 MIR6073-201ENST00000352083 89 ntBASIC3.64□□□□□ -1.83
VPS8Q8N3P4 SMC4P1-201ENST00000414479 527 ntBASIC3.64□□□□□ -1.83
VPS8Q8N3P4 AC022431.1-201ENST00000450941 438 ntBASIC3.64□□□□□ -1.83
VPS8Q8N3P4 RPS27AP9-201ENST00000477681 438 ntBASIC3.64□□□□□ -1.83
VPS8Q8N3P4 AC108860.1-201ENST00000484521 383 ntBASIC3.64□□□□□ -1.83
VPS8Q8N3P4 AL024509.2-201ENST00000493462 493 ntBASIC3.64□□□□□ -1.83
VPS8Q8N3P4 AC034244.2-201ENST00000514668 858 ntBASIC3.64□□□□□ -1.83
VPS8Q8N3P4 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.64□□□□□ -1.83
VPS8Q8N3P4 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.64□□□□□ -1.83
VPS8Q8N3P4 SNORD53-201ENST00000579969 78 ntBASIC3.64□□□□□ -1.83
VPS8Q8N3P4 TUG1_1.1-201ENST00000610654 145 ntBASIC3.64□□□□□ -1.83
VPS8Q8N3P4 AC132825.8-201ENST00000640783 297 ntBASIC3.64□□□□□ -1.83
VPS8Q8N3P4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.64□□□□□ -1.83
VPS8Q8N3P4 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.64□□□□□ -1.83
VPS8Q8N3P4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS8Q8N3P4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.64□□□□□ -1.83
VPS8Q8N3P4 AL161431.1-201ENST00000618966 4205 ntBASIC3.64□□□□□ -1.83
VPS8Q8N3P4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VPS8Q8N3P4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS8Q8N3P4 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VPS8Q8N3P4 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS8Q8N3P4 TRBV12-1-201ENST00000479785 344 ntBASIC3.63□□□□□ -1.83
VPS8Q8N3P4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VPS8Q8N3P4 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS8Q8N3P4 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.63□□□□□ -1.83
VPS8Q8N3P4 ATP5F1P7-201ENST00000567330 760 ntBASIC3.63□□□□□ -1.83
VPS8Q8N3P4 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.63□□□□□ -1.83
VPS8Q8N3P4 VN1R7P-201ENST00000619242 903 ntBASIC3.63□□□□□ -1.83
VPS8Q8N3P4 CYP3A51P-201ENST00000633513 256 ntBASIC3.63□□□□□ -1.83
VPS8Q8N3P4 AC116096.1-201ENST00000566804 2314 ntBASIC3.63□□□□□ -1.83
VPS8Q8N3P4 AC092881.1-201ENST00000638218 2733 ntBASIC3.63□□□□□ -1.83
VPS8Q8N3P4 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
VPS8Q8N3P4 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.62□□□□□ -1.83
VPS8Q8N3P4 RPS15AP28-201ENST00000435088 386 ntBASIC3.62□□□□□ -1.83
VPS8Q8N3P4 AP000705.1-201ENST00000454567 350 ntBASIC3.62□□□□□ -1.83
VPS8Q8N3P4 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.62□□□□□ -1.83
VPS8Q8N3P4 XKRY-201ENST00000510392 1100 ntBASIC3.62□□□□□ -1.83
VPS8Q8N3P4 AC112673.1-201ENST00000513168 575 ntBASIC3.62□□□□□ -1.83
VPS8Q8N3P4 AP000916.1-201ENST00000533869 835 ntBASIC3.62□□□□□ -1.83
VPS8Q8N3P4 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.62□□□□□ -1.83
VPS8Q8N3P4 AC078814.3-201ENST00000553036 491 ntBASIC3.62□□□□□ -1.83
VPS8Q8N3P4 TPMTP1-201ENST00000592307 737 ntBASIC3.62□□□□□ -1.83
VPS8Q8N3P4 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
VPS8Q8N3P4 AC000123.2-201ENST00000623124 461 ntBASIC3.62□□□□□ -1.83
VPS8Q8N3P4 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS8Q8N3P4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS8Q8N3P4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.62□□□□□ -1.83
VPS8Q8N3P4 AC009487.2-201ENST00000420969 6821 ntBASIC3.62□□□□□ -1.83
VPS8Q8N3P4 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
VPS8Q8N3P4 SNORD6-201ENST00000365444 73 ntBASIC3.61□□□□□ -1.83
VPS8Q8N3P4 AL354719.1-201ENST00000406535 843 ntBASIC3.61□□□□□ -1.83
VPS8Q8N3P4 RNA5SP508-201ENST00000411327 119 ntBASIC3.61□□□□□ -1.83
VPS8Q8N3P4 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.61□□□□□ -1.83
VPS8Q8N3P4 AL356320.1-201ENST00000429616 163 ntBASIC3.61□□□□□ -1.83
VPS8Q8N3P4 RPS24P8-201ENST00000431490 402 ntBASIC3.61□□□□□ -1.83
VPS8Q8N3P4 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.61□□□□□ -1.83
VPS8Q8N3P4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.61□□□□□ -1.83
VPS8Q8N3P4 RPL39P40-201ENST00000445481 146 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms