Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 AC104651.1-201ENST00000427559 735 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 AC011998.1-201ENST00000433403 117 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 RPL23AP89-201ENST00000439324 255 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 AC239367.2-201ENST00000447309 705 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 RN7SL585P-201ENST00000470538 280 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 BNIP3P41-201ENST00000503774 571 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 AC109927.2-201ENST00000506416 303 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 RPL37P25-201ENST00000507308 276 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 AC026412.2-201ENST00000512270 1075 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 MTND4LP26-201ENST00000518144 282 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 SOD1P3-201ENST00000518682 454 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 OR5G4P-201ENST00000525251 760 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 AP000790.1-201ENST00000528891 737 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 TRAV8-5-201ENST00000537369 341 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 AC090515.3-201ENST00000560431 315 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 MIR4715-201ENST00000584117 79 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 SNORD39.3-201ENST00000584451 71 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 AC138749.5-201ENST00000611461 208 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 AC013476.2-201ENST00000614456 459 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 AC027807.2-201ENST00000616099 408 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 AL158163.1-201ENST00000603915 1649 ntBASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.9□□□□□ -1.79
CLIP4Q8N3C7 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 XPOTP1-201ENST00000443317 2398 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AC107081.3-201ENST00000612715 2034 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 RNU5F-6P-201ENST00000362979 116 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 RNU6-348P-201ENST00000384386 107 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 OR6C69P-201ENST00000394268 893 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AC109780.2-201ENST00000413467 845 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 SDCBPP2-201ENST00000424643 885 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AC010975.2-201ENST00000427781 588 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 RPS6P12-201ENST00000432491 726 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 MTCO1P48-201ENST00000448024 1096 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 SBDSP1-204ENST00000453858 737 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AC097493.1-201ENST00000463958 372 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AC092757.1-201ENST00000467293 467 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AC010301.1-201ENST00000473936 355 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 MTND6P6-201ENST00000478031 263 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AP000797.1-201ENST00000478870 387 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 RN7SL810P-201ENST00000493031 276 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 MTND2P33-201ENST00000506452 1031 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 PGBD4P4-201ENST00000509673 613 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 MTND5P4-201ENST00000514978 288 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 SNORD116-26-201ENST00000516006 96 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 RNA5SP216-201ENST00000516111 123 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 RNU6-150P-201ENST00000516237 95 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 RNA5SP73-201ENST00000516744 108 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 RNA5SP143-201ENST00000516936 115 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 IGKV2D-23-201ENST00000518179 286 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AC134698.4-201ENST00000523451 826 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AC016957.1-201ENST00000534895 309 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AC084757.1-201ENST00000559987 490 ntBASIC3.89□□□□□ -1.79
CLIP4Q8N3C7 AC091489.2-201ENST00000566263 604 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms